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Table 3 Summary of the different scenarios depending on reference and candidate populations

From: Design of low density SNP chips for genotype imputation in layer chicken

 

A

B

C

D1

D2

E

F

G

H

I

Reference Population

G0

G1

G0 + G1

G2(♂)

G2(♂ + ♀)

G1 + G2(♂)

G0 + G1 + G2(♂)

G0

G1(♂)

G0(♂)

Number of individuals

447

580

1027

73

735

653

1100

447

120

132

Selection Candidates

G1

G2

G2

G3

G3

G3

G3

G2

G3

G3

Number of individuals

580

794

794

541

541

541

541

794

541

541

  1. ♂ indicates that only male breeders are used in the reference population
  2. ♂ +  indicates that both male and female breeders are used in the reference population