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Table 1 Summary information of Amy1 genes identified in grass species

From: Structural organization and functional divergence of high isoelectric point α-amylase genes in bread wheat (Triticum aestivum L.) and barley (Hordeum vulgare L.)

Species

Gene name

gDNA (bp)

Chrd

Protein (aa)

pI

TargetP prediction

SPe

TPlenf

Triticum aestivum (CS)a

TaAmy1-A1 b

1472

6A

427

5.83

0.994

24

 

TaAmy1-A2 b

1470

6A

427

6.00

0.995

24

 

TaAmy1-A3

1773

6A

427

5.84

0.993

24

 

TaAmy1-B1 b

1475

6B

427

5.92

0.990

24

 

TaAmy1-B2 b

1468

6B

427

6.01

0.992

24

 

TaAmy1-B3 b

1491

6B

425

5.84

0.989

22

 

TaAmy1-B4

1494

6B

425

5.84

0.989

22

 

TaAmy1-B5

1494

6B

425

5.84

0.989

22

 

TaAmy1-B6 c

752

6B

–

–

–

–

 

TaAmy1-D1 b

1478

6D

427

5.92

0.993

24

 

TaAmy1-D2 b

1476

6D

425

6.10

0.990

24

 

TaAmy1-D3 b

1757

6D

427

5.92

0.993

24

Triticum urartu (PI428191)a

TuAmy1-A1

1479

6A

427

5.83

0.995

24

 

TuAmy1-A2

1473

6A

427

6.00

0.995

24

 

TuAmy1-A3

1774

6A

427

5.84

0.993

24

Aegilops speltoides (PI542268)a

AesAmy1-B1

1475

6B

425

5.88

0.990

22

 

AesAmy1-B2

1471

6B

425

5.92

0.990

22

 

AesAmy1-B3

1478

6B

427

5.88

0.992

24

 

AesAmy1-B4

1490

6B

427

5.81

0.993

24

 

AesAmy1-B5

1510

6B

425

5.81

0.989

22

 

AesAmy1-B6

1752

6B

427

5.92

0.993

24

Aegilops tauschii (AS2404)a

AetAmy1-D1

1478

6D

427

5.92

0.993

24

 

AetAmy1-D2

1476

6D

425

6.10

0.990

24

 

AetAmy1-D3

1757

6D

427

5.92

0.993

24

Hordeum vulgare

HvAmy1–1

1471

6H

427

5.79

0.993

24

 

HvAmy1–2

1471

6H

427

5.79

0.993

24

 

HvAmy1–3

1471

6H

427

5.79

0.993

24

 

HvAmy1–4

1485

6H

427

5.74

0.994

24

 

HvAmy1–5

1471

–

427

5.79

0.993

24

 

HvAmy1–6 c

682

6H

–

–

–

–

Brachypodium distachyon

BdAmy1

1726

3

428

5.60

0.989

24

Brachypodium stacei

BsAmy1

1650

4

428

5.46

0.991

24

Oryza sativa

OsAmy1–1

1567

2

428

5.07

0.994

25

 

OsAmy1–2

1573

2

428

5.06

0.994

25

Panicum hallii

PhAmy1–1

1598

1

427

5.12

0.987

24

 

PhAmy1–2

1590

1

427

4.98

0.986

23

Setaria italica

SiAmy1

1463

1

427

5.08

0.991

24

Setaria viridis

SvAmy1

1463

1

427

5.08

0.991

24

Sorghum bicolor

SbAmy1–1

1563

4

428

4.99

0.993

24

 

SbAmy1–2

1860

4

428

6.16

0.995

24

Zea mays

ZmAmy1

1651

5

428

5.18

0.986

24

  1. aPlant materials used for Amy1 isolation. bEight cloned full-length Amy1 copies in CS. cThe truncated copies from wheat and barley. dChromosomes. eSecretory pathway. fThe length of signal peptide
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BMC Genomic Data

ISSN: 2730-6844

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