Fig. 7
From: Genome-wide association study of four yield-related traits at the R6 stage in soybean
The candidate regions of the large-effect markers which associated with the 100-pod fresh weight (PFW) and moisture content of fresh seeds (MCFS) in soybean. a AX-90496773 which associated with PFW is located on Gm16. b AX-90460290 which associated with MCFS is located on Gm19. In the top panel, negative log10-transformed P values of SNPs from GWAS for PFW and MCFS are plotted against the physical positions of the given chromosomal regions. The bottom panel depicts the extent of LD in this region based on r2, and the color key displays r2 values. The horizontal dashed line (in blue) indicates the significant threshold of the genome wide association analysis (-log10(p) >4.91). The candidate region for the locus is indicated by two vertical dashed blue lines