Table 3 Summary statistics of sequence quality and alignment information of four pooled liver samples from two groups
Sample group | C1 LG | C2 LG | T1 OG | T2 OG |
|---|---|---|---|---|
Raw reads | 40,726,399 | 35,081,248 | 30,387,651 | 35,584,097 |
Clean reads | 37,187,459 | 31,030,493 | 25,747,921 | 32,929,559 |
Q30 (%) | 85.06% | 85.08% | 85.13% | 85.12% |
GC Content (%) | 49.50% | 49.78% | 49.91% | 50.50% |
Mapped reads | 27,714,503 | 23,061,884 | 19,281,470 | 24,449,321 |
Uniquely mapped reads | 26,783,720 | 22,292,733 | 18,655,917 | 23,595,965 |
Mapping ratio (%) | 74.53% | 74.32% | 74.89% | 74.08% |