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Table 1 List of candidate genes and corresponding significant identified SNPs within or very close (±100 kb) to the SNPs for subclinical ketosis in first lactation (SCK1)

From: Genome-wide association analysis for β-hydroxybutyrate concentration in Milk in Holstein dairy cattle

SNP_name Rs_snp_name chromosome position Ensembl_gene _id Entrez_gene_id
BovineHD0600024204; BovineHD0600024173; BovineHD0600024179; BovineHD0600024201 rs110246305; rs134989847; rs109811572; rs109901151 6 88498400; 88433671; 88441084; 88494442 ENSBTAG00000002348 SLC4A4
BovineHD0600025613 rs109510145 6 92951049 ENSBTAG00000004921 FAM47E
Hapmap44452-BTA-22099 rs41606699 6 89399736 ENSBTAG00000006507 ADAMTS3
BovineHD0600024406 rs137844449 6 89050323 ENSBTAG00000009070 NPFFR2
BovineHD0600026322 rs110306794 6 94884203 ENSBTAG00000010716 FRAS1
BovineHD0600024752; BovineHD0600024746 rs110185652; rs135247183 6 90382995; 90371709 ENSBTAG00000011935 RASSF6
BovineHD0600024291; BovineHD0600024289; BovineHD0600024294;BovineHD0600024290 rs109547247; rs110310151; rs137023501; rs43338561 6 88732184; 88728581; 88735599; 88730717 ENSBTAG00000013718 GC
BovineHD0600024791 rs109793149 6 90557327 ENSBTAG00000019716 CXCL8
BovineHD0600024925; BovineHD0600024923 rs110789319; rs133534783 6 90982259; 90977968 ENSBTAG00000043960 MTHFD2L
BovineHD0600024204; BovineHD0600024173; BovineHD0600024179; BovineHD0600024201 rs110246305; rs134989847; rs109811572; rs109901151 6 88498400; 88433671; 88441084; 88494442 ENSBTAG00000002348 SLC4A4
BovineHD0600025613 rs109510145 6 92951049 ENSBTAG00000004921 FAM47E
Hapmap44452-BTA-22099 rs41606699 6 89399736 ENSBTAG00000006507 ADAMTS3
BovineHD0600024406 rs137844449 6 89050323 ENSBTAG00000009070 NPFFR2
BovineHD0600026322 rs110306794 6 94884203 ENSBTAG00000010716 FRAS1
BovineHD0600024752; BovineHD0600024746 rs110185652; rs135247183 6 90382995; 90371709 ENSBTAG00000011935 RASSF6
BovineHD0600024291; BovineHD0600024289; BovineHD0600024294;BovineHD0600024290 rs109547247; rs110310151; rs137023501; rs43338561 6 88732184; 88728581; 88735599; 88730717 ENSBTAG00000013718 GC
BovineHD0600024791 rs109793149 6 90557327 ENSBTAG00000019716 CXCL8
BovineHD0600024925; BovineHD0600024923 rs110789319; rs133534783 6 90982259; 90977968 ENSBTAG00000043960 MTHFD2L