BMC Genomic Data

Table 4 Identification of the codons showing the signature of positive select based on six different models implemented RDP and CODEML. The codons predicted to be PBR were highlighted by red

From: Polymorphism of MHC class IIB in an acheilognathid species, Rhodeus sinensis shaped by historical selection and recombination

	5	7	8	9	12	17	22	25	27	28	29	30	33	34	35	36	37	38	41	44	50	52	53
Rhsi-DAB1
SLAC		+
FEL	+	+											+		+								+
MEME	+	+			+		+		+		+				+	+	+	+					+
FUBAR	+	+		+				+		+			+		+								+
M2a	+	+		+				+	+	+				+	+								+
M8	+	+		+				+	+	+				+	+							+	+
Rhsi-DAB3
SLAC
FEL
MEME				+		+		+
FUBAR				+				+											+
M2a								+											+
M8								+											+				+
	54	57	58	60	61	63	64	65	67	68	71	72	74	75	77	78	82	83	84	85	86	88	90	91
Rhsi-DAB1
SLAC													+					+
FEL							+		+				+	+				+
MEME		+					+		+	+			+	+	+			+	+	+		+	+
FUBAR		+		+			+		+		+		+	+	+			+
M2a			+	+			+		+		+			+	+		+	+
M8			+	+			+		+		+	+	+		+		+	+		+		+
Rhsi-DAB3
SLAC
FEL
MEME
FUBAR	+		+			+				+	+		+					+
M2a			+	+	+	+	+	+		+	+		+					+		+		+
M8			+	+	+	+	+	+		+	+		+					+		+		+

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ISSN: 2730-6844

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