Rice of Northeast India harbor rich genetic diversity as measured by SSR markers and Zn/Fe content

BMC Genomic Data

Table 2 Summary of markers used in the present study

Locus	na	ne	MAF	H_E	Nei	Fst	PIC
RM1	10.0000	4.2403	0.3662	0.7653	0.7642	0.8164	0.7359
RM154	8.0000	5.1918	0.3200	0.8086	0.8074	0.7367	0.7439
RM131	11.0000	2.5082	0.6123	0.6022	0.6013	0.5789	0.5826
RM135	9.0000	5.5756	0.2738	0.8219	0.8206	0.5358	0.7963
RM153	4.0000	1.9540	0.5815	0.4890	0.4882	0.9389	0.3726
RM125	5.0000	1.9837	0.6231	0.4967	0.4959	0.7735	0.4161
RM72	11.0000	6.4654	0.2569	0.8466	0.8453	0.7703	0.8274
RM171	5.0000	2.5417	0.5308	0.6075	0.6066	0.7768	0.5570
RM287	4.0000	2.7942	0.4846	0.6431	0.6421	0.7614	0.6151
RM302	5.0000	1.4456	0.8154	0.3087	0.3082	0.8473	0.2922
RM3825	4.0000	2.4690	0.5600	0.5959	0.5950	0.9255	0.5624
RM246	10.0000	5.6321	0.2431	0.8237	0.8224	0.7969	0.8036
RM260	6.0000	3.5529	0.3662	0.7196	0.7185	0.8784	0.6710
RM525	6.0000	2.8050	0.5431	0.6445	0.6435	0.9460	0.5986
RM219	5.0000	2.8788	0.4815	0.6536	0.6526	0.9071	0.5998
RM315	2.0000	1.1306	0.9292	0.1157	0.1155	0.8721	0.1012
RM223	12.0000	3.4552	0.4985	0.7117	0.7106	0.5739	0.7060
RM8094	8.0000	3.4626	0.3646	0.7123	0.7112	0.6881	0.6587
RM493	8.0000	3.9689	0.3431	0.7492	0.7480	0.8976	0.7055
RM3412	7.0000	3.9858	0.3231	0.7503	0.7490	0.9166	0.7209
RM443	3.0000	1.4768	0.9723	0.3234	0.3229	0.9619	0.2471
RM169	6.0000	3.2572	0.4523	0.6941	0.6930	0.6990	0.6552
Mean	6.7727	3.3080	0.4973	0.6311	0.6301	0.7870	0.5895
SD ±	2.8273	1.4428	0.2034	0.1863	0.1860	0.1256	0.1920

na Number of alleles, ne Effective number of alleles, MAF Major allele frequency, H_E Expected heterozygosity, Nei Nei’s genetic distance, Fst Genetic differentiation, PIC Polymorphism information content

ISSN: 2730-6844