Genes | Species | Locus | Size (bp) | Exon 1 (bp) | Intron (bp) | Exon 2 (bp) |
---|---|---|---|---|---|---|
HoxA4a | COC | HoxA4ai | 1177 | 89–500 | 501–970 | 971–1177 |
HoxA4aii | 1182 | 89–500 | 501–975 | 976–1182 | ||
BSB | HoxA4a-BSB | 1188 | 89–500 | 501–981 | 982–1188 | |
IDC-F1 | HoxA4ai | 1177 | 89–500 | 501–970 | 971–1177 | |
HoxA4aii | 1182 | 89–500 | 501–975 | 976–1182 | ||
HoxA4aiii | 1184 | 89–500 | 501–977 | 978–1184 | ||
HoxA4a-1 | 1181 | 89–500 | 501–974 | 975–1181 | ||
HoxA4a-BSB | 1188 | 89–500 | 501–981 | 982–1188 | ||
IDMC-F1 | HoxA4ai | 1177 | 89–500 | 501–970 | 971–1177 | |
HoxA4aii | 1182 | 89–500 | 501–975 | 976–1182 | ||
IDMC-F2 | HoxA4ai | 1177 | 89–500 | 501–970 | 971–1177 | |
HoxA4aii | 1182 | 89–500 | 501–975 | 976–1182 | ||
IDC-F2-C | HoxA4ai | 1177 | 89–500 | 501–970 | 971–1177 | |
HoxA4aii | 1182 | 89–500 | 501–975 | 976–1182 | ||
IDC-F2-M | HoxA4ai | 1177 | 89–500 | 501–970 | 971–1177 | |
HoxA4aii | 1182 | 89–500 | 501–975 | 976–1182 | ||
HoxA9a | COC | HoxA9ai | 817 | 1–381 | 382–620 | 621–817 |
HoxA9aii | 891 | 1–381 | 382–694 | 695–891 | ||
BSB | HoxA9b | 879 | 1–381 | 382–682 | 683–879 | |
IDC-F1 | HoxA9ai | 817 | 1–381 | 382–620 | 621–817 | |
HoxA9aii | 867 | 1–381 | 382–670 | 671–867 | ||
IDMC-F1 | HoxA9ai | 817 | 1–381 | 382–620 | 621–817 | |
IDMC-F2 | HoxA9ai | 817 | 1–381 | 382–620 | 621–817 | |
IDC-F2-C | HoxA9ai | 817 | 1–381 | 382–620 | 621–817 | |
HoxA9aii | 891 | 1–381 | 382–694 | 695–891 | ||
IDC-F2-M | HoxA9ai | 817 | 1–381 | 382–620 | 621–817 | |
HoxA2b | COC | HoxA2bi | 1490 | 1–314 | 315–905 | 906–1490 |
HoxA2bii | 1475 | 1–314 | 315–890 | 891–1475 | ||
BSB | HoxA2b | 1479 | 1–311 | 312–894 | 895–1479 | |
IDC-F1 | HoxA2bi | 1490 | 1–314 | 315–905 | 906–1490 | |
HoxA2bii | 1475 | 1–314 | 315–890 | 891–1475 | ||
HoxA2biii | 1486 | 1–314 | 315–901 | 902–1486 | ||
HoxA2b-1 | 1448 | 1–314 | 315–863 | 864–1448 | ||
IDMC-F1 | HoxA2bi | 1490 | 1–314 | 315–905 | 906–1490 | |
HoxA2bii | 1475 | 1–314 | 315–890 | 891–1475 | ||
IDC-F2-C | HoxA2bi | 1490 | 1–314 | 315–905 | 906–1490 | |
HoxA2bii | 1475 | 1–314 | 315–890 | 891–1475 | ||
IDC-F2-M | HoxA2bi | 1490 | 1–314 | 315–905 | 906–1490 | |
HoxA2bii | 1475 | 1–314 | 315–890 | 891–1475 | ||
IDMC-F2 | HoxA2bi | 1490 | 1–314 | 315–905 | 906–1490 | |
HoxA2bii | 1475 | 1–314 | 315–890 | 891–1475 | ||
HoxA11b | COC | HoxA11bi | 1440 | 3–590 | 591–1342 | 1343–1440 |
BSB | HoxA11b-BSB | 1703 | 3–602 | 603–1605 | 1606–1703 | |
IDC-F1 | HoxA11bi | 1440 | 3–590 | 591–1342 | 1343–1440 | |
HoxA11bii | 1401 | 3–590 | 591–1303 | 1304–1401 | ||
IDMC-F1 | HoxA11bi | 1439 | 3–590 | 591–1342 | 1343–1439 | |
IDMC-F2 | HoxA11bi | 1439 | 3–590 | 591–1342 | 1343–1439 | |
IDC-F2-C | HoxA11bi | 1440 | 3–590 | 591–1342 | 1343–1440 | |
IDC-F2-M | HoxA11bi | 1440 | 3–590 | 591–1342 | 1343–1440 | |
HoxB1a | COC | HoxB1aiψ | 1510 | – | – | – |
HoxB1aii | 1526 | 1–462 | 463–1250 | 1251–1526 | ||
BSB | HoxB1a | 1522 | 1–459 | 460–1246 | 1247–1522 | |
IDC-F1 | HoxB1aiψ | 1510 | – | – | – | |
HoxB1aiii | 1484 | 1–450 | 451–1208 | 1209–1484 | ||
IDMC-F1 | HoxB1aiψ | 1510 | – | – | – | |
HoxB1aii | 1525 | 1–462 | 463–1249 | 1250–1525 | ||
IDMC-F2 | HoxB1aiψ | 1510 | – | – | – | |
IDC-F2-C | HoxB1aiψ | 1510 | – | – | – | |
IDC-F2-M | HoxB1aiψ | 1510 | – | – | – | |
HoxB4aψ | COC | HoxB4aiψ | 1631 | – | – | – |
BSB | HoxB4aψ | 1617 | – | – | – | |
IDC-F1 | HoxB4aiψ | 1630 | – | – | – | |
HoxB4aiiψ | 1613 | – | – | – | ||
IDMC-F1 | HoxB4aiψ | 1630 | – | – | – | |
IDMC-F2 | HoxB4aiψ | 1630 | – | – | – | |
IDC-F2-C | HoxB4aiψ | 1630 | – | – | – | |
IDC-F2-M | HoxB4aiψ | 1630 | – | – | – | |
HoxB1b | COC | HoxB1bi | 731 | 1–477 | 478–565 | 566–731 |
BSB | HoxB1b-BSB | 751 | 1–477 | 478–585 | 586–751 | |
IDC-F1 | HoxB1bi | 731 | 1–477 | 478–565 | 566–731 | |
HoxB1bii | 733 | 1–477 | 478–567 | 568–733 | ||
HoxB1b-BSB | 751 | 1–477 | 478–585 | 586–751 | ||
IDMC-F1 | HoxB1bi | 731 | 1–477 | 478–565 | 566–731 | |
IDMC-F2 | HoxB1bi | 731 | 1–477 | 478–565 | 566–731 | |
IDC-F2-C | HoxB1bi | 731 | 1–477 | 478–565 | 566–731 | |
IDC-F2-M | HoxB1bi | 731 | 1–477 | 478–565 | 566–731 | |
HoxB5b | COC | HoxB5bi | 1191 | 1–561 | 562–985 | 986–1191 |
HoxB5bii | 1190 | 1–564 | 565–984 | 985–1190 | ||
BSB | HoxB5b-BSB | 1227 | 1–564 | 565–1021 | 1022–1227 | |
IDC-F1 | HoxB5bi | 1191 | 1–561 | 562–985 | 986–1191 | |
HoxB5bii | 1190 | 1–564 | 565–984 | 985–1190 | ||
HoxB5biii | 1196 | 1–561 | 562–990 | 991–1196 | ||
HoxB5b-BSB | 1226 | 1–564 | 565–1020 | 1021–1226 | ||
IDMC-F1 | HoxB5bi | 1191 | 1–561 | 562–985 | 986–1191 | |
HoxB5bii | 1190 | 1–564 | 565–984 | 985–1190 | ||
IDMC-F2 | HoxB5bi | 1191 | 1–561 | 562–985 | 986–1191 | |
IDC-F2-C | HoxB5bi | 1190 | 1–561 | 562–984 | 985–1190 | |
HoxB5bii | 1190 | 1–564 | 565–984 | 985–1190 | ||
IDC-F2-M | HoxB5bi | 1190 | 1–561 | 562–984 | 985–1190 | |
HoxB5bii | 1190 | 1–564 | 565–984 | 985–1190 | ||
HoxC4a | COC | HoxC4ai | 1169 | 1–410 | 411–928 | 929–1169 |
HoxC4aii | 1176 | 1–410 | 411–935 | 936–1176 | ||
BSB | HoxC4a | 1125 | 1–410 | 411–933 | 934–1125 | |
IDC-F1 | HoxC4ai | 1169 | 1–410 | 411–928 | 929–1169 | |
HoxC4aii | 1176 | 1–410 | 411–935 | 936–1176 | ||
HoxC4aiii | 1173 | 1–410 | 411–932 | 933–1173 | ||
HoxC4a-1 | 1179 | 1–410 | 411–938 | 939–1179 | ||
IDMC-F1 | HoxC4ai | 1169 | 1–410 | 411–928 | 929–1169 | |
HoxC4aii | 1176 | 1–410 | 411–935 | 936–1176 | ||
IDMC-F2 | HoxC4ai | 1168 | 1–410 | 411–928 | 929–1168 | |
HoxC4aii | 1174 | 1–410 | 411–934 | 935–1174 | ||
IDC-F2-C | HoxC4ai | 1169 | 1–410 | 411–928 | 929–1169 | |
HoxC4aii | 1176 | 1–410 | 411–935 | 936–1176 | ||
IDC-F2-M | HoxC4ai | 1169 | 1–410 | 411–928 | 929–1169 | |
HoxC4aii | 1175 | 1–410 | 411–934 | 935–1175 | ||
HoxC6b | COC | HoxC6bi | 942 | 2–392 | 393–763 | 764–942 |
BSB | HoxC6b-BSB | 922 | 2–392 | 393–737 | 738–922 | |
IDC-F1 | HoxC6bi | 949 | 2–392 | 393–763 | 764–949 | |
HoxC6bii | 964 | 2–392 | 393–778 | 779–964 | ||
HoxC6b-BSB | 923 | 2–392 | 393–737 | 738–923 | ||
IDMC-F1 | HoxC6bi | 949 | 2–392 | 393–763 | 764–949 | |
IDMC-F2 | HoxC6bi | 949 | 2–392 | 393–763 | 764–949 | |
IDC-F2-C | HoxC6bi | 949 | 2–392 | 393–763 | 764–949 | |
IDC-F2-M | HoxC6bi | 949 | 2–392 | 393–763 | 764–949 | |
HoxD4a | COC | HoxD4ai | 942 | 1–315 | 316–717 | 718–942 |
HoxD4aii | 944 | 1–315 | 316–719 | 720–944 | ||
BSB | HoxD4a-BSB | 911 | 1–306 | 307–686 | 687–911 | |
IDC-F1 | HoxD4ai | 942 | 1–315 | 316–717 | 718–942 | |
HoxD4aii | 944 | 1–315 | 316–719 | 720–944 | ||
HoxD4aiii | 952 | 1–315 | 316–727 | 728–952 | ||
HoxD4a-1 | 937 | 1–315 | 316–712 | 713–937 | ||
HoxD4a-2 | 960 | 1–315 | 316–735 | 736–960 | ||
HoxD4a-BSB | 911 | 1–306 | 307–686 | 687–911 | ||
IDMC-F1 | HoxD4ai | 942 | 1–315 | 316–717 | 718–942 | |
HoxD4aii | 944 | 1–315 | 316–719 | 720–944 | ||
IDMC-F2 | HoxD4ai | 942 | 1–315 | 316–717 | 718–942 | |
HoxD4aii | 944 | 1–315 | 316–719 | 720–944 | ||
IDC-F2-C | HoxD4ai | 942 | 1–315 | 316–717 | 718–942 | |
HoxD4aii | 944 | 1–315 | 316–719 | 720–944 | ||
IDC-F2-M | HoxD4ai | 942 | 1–315 | 316–717 | 718–942 | |
HoxD4aii | 944 | 1–315 | 316–719 | 720–944 | ||
HoxD10a | COC | HoxD10ai | 1551 | 1–589 | 590–1321 | 1322–1551 |
HoxD10aii | 1546 | 1–592 | 593–1316 | 1317–1546 | ||
BSB | HoxD10a-BSB | 1574 | 1–592 | 593–1344 | 1345–1574 | |
IDC-F1 | HoxD10ai | 1554 | 1–589 | 590–1324 | 1325–1554 | |
HoxD10aii | 1546 | 1–592 | 593–1316 | 1317–1546 | ||
HoxD10aiii | 1495 | 1–592 | 593–1265 | 1266–1495 | ||
HoxD10a-1 | 1480 | 1–592 | 593–1250 | 1251–1480 | ||
HoxD10a-BSB | 1574 | 1–592 | 593–1344 | 1345–1574 | ||
IDMC-F1 | HoxD10ai | 1554 | 1–589 | 590–1324 | 1325–1554 | |
HoxD10aii | 1546 | 1–592 | 593–1316 | 1317–1546 | ||
IDMC-F2 | HoxD10ai | 1554 | 1–589 | 590–1324 | 1325–1554 | |
HoxD10aii | 1546 | 1–592 | 593–1316 | 1317–1546 | ||
IDC-F2-C | HoxD10ai | 1554 | 1–589 | 590–1324 | 1325–1554 | |
HoxD10aii | 1546 | 1–592 | 593–1316 | 1317–1546 | ||
IDC-F2-M | HoxD10ai | 1554 | 1–589 | 590–1324 | 1325–1554 | |
HoxD10aii | 1544 | 1–592 | 593–1314 | 1315–1544 |