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Table 3 Percentage nucleotide identity (on the left) and percentage amino acid identity (on the right) between duplicated Hox coding regions in COC, BSB, IDC-F1, IDMC-F1, IDMC-F2, IDC-F2-C, and IDC-F2-M (following the format below)

From: Rapid genomic DNA variation in newly hybridized carp lineages derived from Cyprinus carpio (♀) × Megalobrama amblycephala (♂)

 HoxA4a (%)HoxA9a (%)HoxA2b (%)HoxA11b (%)HoxB1a (%)HoxB4a (%)HoxB1b (%)HoxB5b (%)HoxC4a (%)HoxC6b (%)HoxD4a (%)HoxD10a (%)
IDC-F1 i: IDC-F1 ii94.5/98.581.8/88.593.7/97.688.9/96.092.3/P94.8/95.794.1/96.498.0/99.092.1/98.490.7/96.688.0/97.0
: IDC-F1 iii93.0/98.596.1/97.991.5/P94.8/96.098.5/98.686.9/94.985.8/96.3
: IDC-F1 (1)96.4/98.090.1/95.997.5/99.098.5/99.490.3/97.4
: IDC-F1 (2)89.1/95.5
: IDC-F1 (BSB)92.3/98.586.2/91.189.4/97.283.4/97.387.8/94.981.3/96.7
: IDMC-F1 i100.0/100.099.8/100.099.5/98.999.8/99.899.6/P99.7/P100.0/100.0100.0/100.0100.0/100.0100.0/100.099.8/99.499.9/100.0
: IDMC-F1 ii94.6/98.593.8/97.388.1/P94.3/96.897.9/98.690.8/97.288.3/97.4
: IDMC-F2 i100.0/100.0100.0/100.099.6/98.999.7/99.799.5/P99.6/P100.0/100.0100.0/100.099.9/100.099.8/100.099.8/99.499.6/99.6
: IDMC-F2 ii94.5/98.593.7/97.397.7/98.690.9/97.288.4/97.4
: IDC-F2-C i99.7/99.099.8/100.099.6/98.699.9/100.099.4/P99.7/P100.0/100.099.8/100.0100.0/100.099.8/100.099.7/98.8100.0/100.0
: IDC-F2-C ii94.5/98.580.1/86.993.7/97.694.3/96.898.0/99.090.9/97.288.5/97.4
: IDC-F2-M i99.9/100.099.8/100.099.7/99.3100.0/100.099.5/P99.7/P100.0/100.099.8/100.099.9/100.099.8/100.099.7/99.499.9/100.0
: IDC-F2-M ii94.2/98.593.7/97.694.3/96.497.9/99.090.8/96.688.2/97.0
: COC i99.8/99.0100.0/100.099.6/99.399.8/99.799.5/P99.8/P99.5/100.099.9/100.099.9/100.099.1/98.999.6/98.899.2/98.5
: COC ii94.5/98.080.2/88.593.8/97.688.2/P94.1/96.498.0/99.090.8/97.288.3/97.4
: BSB92.3/98.577.3/85.494.9/96.974.2/94.586.7/P85.9/P86.2/91.189.9/97.693.4/91.683.3/97.387.8/94.981.4/97.0
IDC-F1 ii: IDC-F1 iii96.2/99.592.6/97.693.2/95.798.4/99.592.7/96.087.9/95.6
: IDC-F1 (1)93.5/97.592.3/96.398.7/100.090.8/97.284.0/96.7
: IDC-F1 (2)86.0/94.4
: IDC-F1 (BSB)92.2/98.086.4/89.790.0/96.081.3/96.386.2/93.881.0/96.3
: IDMC-F1 i94.5/98.581.9/88.593.7/97.988.8/95.992.3/P94.8/95.794.1/96.498.0/99.092.1/98.490.8/97.288.1/97.0
: IDMC-F1 ii99.7/100.099.7/99.699.1/99.699.9/99.599.4/99.499.2/98.9
: IDMC-F2 i94.5/98.581.8/88.593.7/97.988.9/96.092.3/P94.8/95.794.1/96.497.9/99.092.0/98.490.8/97.287.8/97.4
: IDMC-F2 ii99.8/100.099.5/99.699.6/99.599.5/99.499.4/99.6
: IDC-F2-C i94.4/97.581.9/88.593.7/97.688.9/96.092.3/P94.8/95.793.9/96.498.0/99.092.0/98.490.7/96.688.0/97.0
: IDC-F2-C ii99.8/100.092.6/95.899.5/100.099.3/99.6100.0/100.099.5/99.499.4/99.6
: IDC-F2-M i94.6/98.581.9/88.593.9/98.388.9/96.092.3/P94.8/95.794.1/96.498.1/99.092.0/98.490.7/97.288.0/97.0
: IDC-F2-M ii99.5/100.099.5/100.099.1/99.299.8/100.099.4/98.899.2/99.2
: COC i94.5/98.581.8/88.593.9/98.388.9/95.992.2/P94.6/95.794.0/96.498.1/99.091.5/97.390.8/96.687.6/96.3
: COC ii99.6/99.592.1/95.399.7/100.099.1/99.2100.0/100.099.3/99.499.5/99.6
: BSB92.2/98.081.0/90.194.9/97.371.6/91.685.4/P86.4/89.790.4/96.493.3/92.581.4/96.386.2/93.881.1/96.7
IDC-F1 iii: IDC-F1 (1)92.0/97.089.8/96.398.3/99.586.9/95.584.6/98.1
: IDC-F1 (2)86.0/96.0
: IDC-F1 (BSB)90.8/97.588.7/95.784.1/92.778.4/95.2
: IDMC-F1 i93.0/98.596.1/98.391.2/P94.8/96.098.5/98.687.0/95.585.7/96.3
: IDMC-F1 ii96.2/99.592.6/97.384.7/92.693.4/96.098.3/99.092.8/96.688.2/95.9
: IDMC-F2 i93.0/98.596.2/98.391.2/P94.8/96.098.4/98.687.0/95.585.7/96.7
: IDMC-F2 ii96.2/99.592.5/97.398.2/99.092.9/96.688.2/95.9
: IDC-F2-C i92.7/97.596.2/97.991.1/P94.8/96.098.5/98.686.9/94.985.8/96.3
: IDC-F2-C ii96.2/99.592.5/97.693.5/96.098.4/99.592.9/96.688.2/95.9
: IDC-F2-M i92.9/98.596.3/98.691.2/P94.6/96.098.6/98.686.9/95.585.8/96.3
: IDC-F2-M ii95.9/99.592.5/97.693.4/95.798.3/99.592.8/96.088.1/95.6
: COC i93.0/98.096.2/98.691.2/P94.7/96.098.6/98.687.0/94.985.4/95.6
: COC ii96.2/99.092.6/97.684.9/92.693.4/95.798.4/99.592.7/96.688.1/95.9
: BSB90.8/97.593.5/97.383.4/94.288.8/96.093.3/92.184.1/92.778.5/95.6
IDC-F1 (1): IDC-F1 (2)88.8/96.0
: IDC-F1 (BSB)91.3/97.587.8/95.578.1/96.3
: IDMC-F1 i96.4/98.090.1/96.397.5/99.098.6/100.090.3/97.4
: IDMC-F1 ii93.5/97.592.4/95.998.6/99.590.9/97.784.2/97.0
: IDMC-F2 i96.4/98.090.2/96.397.4/99.098.6/100.090.2/97.8
: IDMC-F2 ii93.5/97.592.3/95.998.3/99.591.0/97.784.2/97.0
: IDC-F2-C i96.1/97.090.2/95.997.5/99.098.5/99.490.3/97.4
: IDC-F2-C ii93.5/97.592.3/96.398.7/100.091.0/97.784.3/97.0
: IDC-F2-M i96.3/98.090.3/96.697.6/99.098.5/100.090.3/97.4
: IDC-F2-M ii93.2/97.592.3/96.398.5/100.090.9/97.284.1/96.7
: COC i96.4/98.090.2/96.697.6/99.098.6/99.490.1/96.7
: COC ii93.5/97.092.4/96.398.7/100.090.9/97.784.2/97.0
: BSB91.3/97.591.0/96.393.4/92.587.8/95.578.2/96.7
IDC-F1 (2): IDC-F1 (BSB)83.5/94.4
: IDMC-F1 i89.2/96.0
: IDMC-F1 ii86.2/94.9
: IDMC-F2 i89.2/96.0
: IDMC-F2 ii86.3/94.9
: IDC-F2-C i89.1/95.5
: IDC-F2-C ii86.3/94.9
: IDC-F2-M i89.1/96.0
: IDC-F2-M ii86.2/94.4
: COC i89.2/95.5
: COC ii86.1/94.9
: BSB83.5/94.4
IDC-F1 (BSB): IDMC-F1 i92.3/98.586.2/91.189.4/97.283.4/97.387.9/95.581.4/96.7
: IDMC-F1 ii92.3/98.090.0/96.486.5/94.481.3/96.7
: IDMC-F2 i92.3/98.586.2/91.189.4/97.283.4/97.387.9/95.581.2/97.0
: IDMC-F2 ii92.2/98.086.6/94.481.3/96.7
: IDC-F2-C i92.0/97.586.2/91.189.4/97.283.5/97.387.8/94.981.3/96.7
: IDC-F2-C ii92.2/98.090.2/96.486.6/94.481.3/96.7
: IDC-F2-M i92.2/98.586.2/91.189.3/97.283.3/97.387.8/95.581.3/96.7
: IDC-F2-M ii91.9/98.090.0/96.086.5/93.881.2/96.3
: COC i92.3/98.586.0/91.189.4/97.282.7/96.387.9/94.980.9/95.9
: COC ii92.2/97.590.0/96.086.5/94.481.3/96.7
: BSB100.0/100.0100.0/100.098.4/99.699.5/100.0100.0/100.099.8/99.6
  1. Notes: Values before slashes (/) denote nucleotide identity, and values after slashes denote amino acid identity; P represents one or two amino acid sequences as pseudogene sequences for which the identity cannot be compared