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Table 1 Estimates of Fst values for complete and pruned data

From: Assessing the power of principal components and wright’s fixation index analyzes applied to reveal the genome-wide genetic differences between herds of Holstein cows

Herd12345678910111213
1 0.005a0.0050.0060.0060.0040.0060.0040.0030.0050.0050.0050.004
20.006b 0.0040.0120.0060.0060.0060.0030.0020.0040.0030.0030.007
30.0050.003 0.0090.0030.0040.0050.0020.0020.0030.0040.0030.005
40.0060.0120.009 0.0090.0040.0110.0080.0090.0110.0110.0120.006
50.0060.0050.0030.009 0.0050.0060.0040.0040.0040.0060.0050.005
60.0040.0060.0030.0040.005 0.0070.0040.0050.0060.0050.0050.004
70.0060.0060.0050.0100.0060.006 0.0040.0060.0060.0070.0050.007
80.0050.0030.0020.0090.0040.0040.005 0.0030.0040.0030.0040.004
90.0040.0020.0020.0090.0040.0050.0060.002 0.0040.0030.0030.006
100.0050.0050.0040.0110.0040.0060.0060.0040.004 0.0050.0040.007
110.0060.0030.0040.0110.0060.0050.0070.0030.0030.005 0.0050.006
120.0050.0020.0030.0110.0040.0050.0050.0030.0030.0040.004 0.008
130.0050.0070.0050.0060.0050.0040.0070.0040.0050.0070.0060.007 
  1. a Fst values for complete data are above the diagonal and Fst values for pruned data are below the diagonal
  2. b Increased Fst values for pruned data compared to complete data are in bold and decreased Fst values are in bold Italic. Fst values in bold are significantly different from those values in the complete data in range of P = 0.05–0.006 exept of the herds pair 4 and 12 which was insignificant)