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Table 2 Estimates between herds genetic differences (P – values) a

From: Assessing the power of principal components and wright’s fixation index analyzes applied to reveal the genome-wide genetic differences between herds of Holstein cows

Herd_HerdPC 1PC 1 Pruned dataPC 3Summed 10 eigenvectorsSummed 20 eigenvectorsSummed 100 eigenvectorsSummed 100 eigenvectors Pruned datFstP-values
1_20.00310.00341.6E-054.2e-071.5e-113.0e-151.e-164.1e-49
1_30.04440.04600.00170.00021.3e-099.8e-184.1e-193.3e-47
1_40.00290.00290.05985.6e-054.6e-072.8e-104.7e-083.54e-32
1_50.85170.86520.00070.02896.6e-117.2e-175.0e-213.4e-40
1_60.67510.67480.69480.05047.81e-051.0e-136.4e-111.35e-38
1_70.01900.02020.12302.95e-073.1e-102.4e-251.4e-221.8e-54
1_80.03700.03810.05510.01379.5e-064.2e-082.5e-124.99e-37
1_90.27760.28540.00020.00560.00011.2e-105.4e-172.98e-26
1_100.01410.01460.08560.10300.00011.2e-121.1e-153.7e-35
1_110.00120.00130.00195.23e-057.4e-087.7e-143.0e-141.5e-45
1_120.00750.00790.00531.085e-51.9e-103.4e-187.0e-193.2e-34
1_130.45780.45540.63250.01410.00014.7e-191.0e-142.5e-40
2_30.15390.15610.07983.34e-066.7e-062.0e-141.4e-147.7e-42
2_41.0e-091.3e-091.8e-086.52e-179.9e-213.3e-246.0e-221.2e-54
2_50.00330.00340.73950.00011.6e-063.3e-181.2e-255.2e-59
2_60.00070.00076.1E-068.58e-78.2e-102.2e-163.8e-174.0e-58
2_70.28930.28680.00021.48e-141.9e-178.9e-264.7e-263.6e-60
2_80.41540.41790.01940.00028.9e-062.3e-112.5e-123.9e-28
2_90.01890.01940.70350.01560.01982.7e-115.1e-133.2e-20
2_100.82810.83120.01490.01190.00632.2e-121.7e-192.3e-41
2_110.61820.61890.11550.00201.7e-055.7e-064.7e-082.4e-27
2_120.85210.85020.12060.00030.000746.9e-111.1e-117.3e-20
2_132.9e-053.3e-050.00016.82e-151.6e-183.6e-267.7e-306.1e-49
3_41.0e-081.21e-082.4e-066.19e-131.80e-161.5e-211.2e-161.7e-51
3_50.04860.04840.25290.00630.00192.9e-137.1E-142.6e-26
3_60.01090.01150.00060.00046.4e-065.0e-127.9E-093.6e-40
3_70.63140.64280.02352.31e-053.7e-104.6e-228.9e-209.7e-48
3_80.62960.63060.33590.06150.00369.6e-062.0e-42.7e-19
3_90.26620.26610.22690.00890.010454.7e-104.3e-095.1e-16
3_100.24720.24790.25370.00520.002165.6e-109.6e-132.2e-25
3_110.04690.04750.89650.00882.9e-055.6e-103.7e-142.3e-39
3_120.22410.22720.99238.49e-068.9e-081.5e-121.9e-101.6e-19
3_130.00090.00090.00921.91e-053.6e-073.4e-231.5e-186.1e-49
4_50.00060.00075.0e-062.48e-072.8e-118.2e-172.5e-161.7e-51
4_60.00990.01000.14220.09490.15702.8e-122.5e-064.6e-23
4_74.4e-105.4e-100.00064.86e-149.7e-161.4e-301.5e-245.5e-45
4_81.37e-71.5e-070.00054.08e-091.0e-113.5e-158.4e-124.8e-46
4_93.0e-063.5e-065.2e-071.73e-112.9e-155.0e-243.3e-202.0e-44
4_102.8e-083.1e-080.00146.38e-091.7e-101.1e-196.0e-161.2e-41
4_112.9e-103.3e-104.7e-065.80e-162.1e-145.5e-187.7e-157.8e-50
4_125.9e-096.9e-092.2e-054.39e-114.1e-164.8e-261.6e-206.1e-53
4_130.00580.00610.02095.90e-063.2e-051.6e-222.1e-151.1e-39
5_60.52390.53550.00030.00131.1e-055.1e-159.1e-151.4e-33
5_70.01560.01600.00452.77e-064.4e-094.1e-243.3e-281.1e-40
5_80.03710.03710.08910.00080.00012.4e-117.2e-143.9e-37
5_90.34300.34290.98730.07555.5e-062.8e-151.9e-202.3e-42
5_100.01080.01090.07220.12440.029973.3e-136.4e-183.7e-36
5_110.00090.00090.31482.33e-071.3e-113.7e-144.9E-215.6e-56
5_120.00690.00700.31210.00245.9e-057.4e-173.2e-173.6e-40
5_130.30610.31440.00278.21e-054.4e-074.7e-205.3e-201.3e-54
6_70.00360.00380.05381.88e-089.8e-111.1e-279.4e-224.1e-43
6_80.01110.01140.02670.00202.8e-052.1e-122.1e-098.7e-35
6_90.11110.11548.6e-050.00107.3e-074.4e-171.0e-172.1e-47
6_100.00370.00380.04470.00150.00056.5e-173.2e-168.7e-39
6_110.00020.00020.00072.85e-062.5e-052.4e-123.9e-125.6e-45
6_120.00180.00190.00220.00012.7e-061.8e-172.9e-136.5e-34
6_130.79500.79220.39390.00020.000893.6e-141.8e-125.2e-40
7_80.90930.89950.40630.00021.9e-071.5e-151.0e-161.7e-38
7_90.11370.11710.00272.58e-093.9e-142.1e-271.2E-321.1e-57
7_100.36260.35560.49610.00053.0e-061.9e-254.5e-233.3e-37
7_110.08690.08540.01777.31e-121.5e-173.5e-245.2e-249.9e-46
7_120.37510.37230.05642.10e-054.6e-075.6e-252.2e-227.7e-33
7_130.00010.00010.33164.05e-132.2e-141.3e-334.4e-237.4e-47
8_90.16100.16120.06800.00610.00071.4e-062.0e-062.6e-26
8_100.56290.56260.88780.10350.00388.2e-127.7e-146.1e-34
8_110.19460.19560.30000.07180.00113.2e-074.4E-111.4e-25
8_120.52850.53210.40495.78e-062.2e-075.5e-105.6E-111.5e-33
8_130.00110.00110.14630.00619.3e-051.3e-146.2E-144.2e-42
9_100.04900.04930.05620.03620.00276.1e-132.1E-175.2e-40
9_110.00490.00500.29080.02340.00013.0e-096.0E-131.2e-30
9_120.03560.03630.28170.00011.2e-064.2e-158.5E-182.9e-30
9_130.03010.03160.00111.54e-086.4e-113.0e-221.2E-278.6e-59
10_110.48250.48520.22140.00092.1e-053.1e-171.7E-201.5e-33
10_120.96460.96580.33120.01080.03312.3e-122.1E-206.7e-38
10_130.00020.00020.20615.82e-066.7e-074.6e-251.7E-254.9e-43
11_120.49910.49760.90381.02e-071.3e-113.4e-182.8E-157.6e-47
11_135.5e-066.0e-060.00961.98e-092.2e-106.0e-166.0E-151.8e-38
12_139.1e-059.9e-050.02072.12e-145.6e-188.9e-262.4E-223.5e-53
  1. a complete data except for special marks in column names