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Table 7 Between herds genetic differences for pruned data revealed by summed PC 1–100

From: Assessing the power of principal components and wright’s fixation index analyzes applied to reveal the genome-wide genetic differences between herds of Holstein cows

Herd

1

2

3

4

5

6

7

8

9

10

11

12

13

1

 

+

+

 

+

 

+

 

+

+

+

+

+

2

  

+

+

+

+

+

 

+

+

  

+

3

   

+

+

 

+

  

+

+

 

+

4

 

+

+

 

+

 

+

 

+

+

+

+

+

5

+

+

    

+

 

+

+

+

+

+

6

      

+

 

+

+

 

+

 

7

+

+

 

+

+

+

 

+

+

+

+

+

+

8

         

+

  

+

9

     

+

+

  

+

 

+

+

10

      

+

   

+

 

+

11

    

+

 

+

    

+

+

12

      

+

     

+

13

 

+

    

+

 

+

+

 

+

 
  1. + − above diagonal denote significant genetic difference between pair of the herds at cut off P ≤ 1.28e-12 (P ≤ 1.0e-10 was adjusted by the Bonferroni correction). Below diagonal denote significant genetic difference between pairs of the herds at cut off P ≤ 1.28e-20 (P ≤ 1.0e-18 was adjusted by the Bonferroni correction)