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Table 1 Genetic characteristics of analysed loci (upper half) and sites (lower half). Number of alleles per locus (Na), the size range of each locus, allelic richness, unbiased expected heterozygosity (He), observed heterozygosity (Ho), fixation index (FIS), deviations from HW equilibrium, total number of analysed samples (n), number of males and females, number of sequenced samples and haplotypes, haplotype diversity (h) and nucleotide diversity (Ï€) for each site and riverside, respectively

From: Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia

Locus

Na

Size range [bp]

Allelic richness

He

Ho

FIS

Sites out of HWE

   

Js 22

7

172–186

2.670

0.496

0.483

0.027

    

Js 183

11

134–144

4.373

0.794

0.759

0.044

    

Js 188

15

182–201

4.542

0.789

0.759

0.039

    

TB 8

4

404–420

2.831

0.621

0.595

0.043

NA, ND

   

TB 14

36

457–569

7.115

0.966

0.482

0.503**

all, exc. SI

   

TB 15

31

284–344

6.601

0.942

0.905

0.040

    

TB 16

16

170–203

4.174

0.697

0.655

0.060

    

TB 18

32

408–544

6.452

0.933

0.888

0.049*

    

Site

n

Males/Females

Allelic richness

He

Ho

FIS

Sequences/Haplotypes

h

Ï€

Area [km2]

NA

11

6 / 5

4.911

0.725

0.727

−0.004

8 / 6

0.893

0.008

22.17

NB

18

10 / 8

5.105

0.788

0.786

0.003

7 / 4

0.714

0.007

41.60

NC

5

4 / 1

4.571

0.698

0.771

−0.119

2 / 2

1.000

0.012

9.66

ND

17

9 / 8

5.013

0.731

0.714

0.024

10 / 5

0.800

0.008

73.17

North

51

29 / 22

4.962

0.761

0.748

0.017

27 / 11

0.889

0.009

146.60

SE

11

8 / 3

4.257

0.740

0.753

−0.019

6 / 3

0.733

0.005

47.99

SF

21

9 / 12

3.902

0.685

0.674

0.018

7 / 4

0.810

0.005

1.25

SG

29a

14 / 14

3.888

0.689

0.714

−0.037

17 / 3

0.581

0.004

17.14

SI

4

3 / 1

3.286

0.628

0.571

0.103

3 / 2

0.667

0.012

16.14

South

65a

34 / 30

3.895

0.718

0.699

0.026

33 / 6

0.695

0.006

82.52

All

116a

63 / 52

4.414

0.753

0.720

0.044**

60 / 14

0.878

0.008

229.12

  1. *p ≤ 0.05, **p ≤ 0.01, aone individual of unknown sex