BMC Genomic Data

Table 1 Transcriptome analysis of candidate reference genes

From: Optimal reference genes for gene expression analysis in polyploid of Cyprinus carpio and Carassius auratus

Gene	Tissues							Cultured cells
Gene	Tissues (FPKM)			log2FoldChange		P value		Cells (FPKM)			log2FoldChange		P value
	2 N	3 N	JL4N	3 N/2 N	JL4N/2 N	3 N/2 N	JL4N/2 N	2 N	JL4N	SP4N	JL4N/2 N	SP4N/2 N	JL4N/2 N	SP4N/2 N
RPS5	849.24	678.32	473.93	−0.32	− 0.84	0.10	0.01	849.24	856.28	667.33	0.01	−0.35	0.93	0.05
RPS18	2068.00	1038.73	1183.93	−0.99	− 0.80	0.32	0.31	1219.08	1758.57	974.64	0.53	−0.32	0.04	0.22
RPL7	911.01	862.83	224.46	−0.08	−2.02	0.68	0.00	911.01	1107.82	754.63	0.28	−0.27	0.14	0.10
RPLP2	238.01	372.57	949.56	0.65	2.00	0.23	0.14	238.01	442.26	153.76	0.89	−0.63	0.00	0.10
RPL13α	982.73	715.70	251.13	−0.46	−1.97	0.15	0.00	1083.97	1434.20	689.13	0.40	−0.65	0.01	0.02
β-actin	578.00	128.05	435.73	−2.17	−0.41	0.14	0.57	1212.30	2115.03	1517.57	0.80	0.32	0.08	0.33
EF1-α	2074.67	2286.30	855.60	0.14	−1.28	0.65	0.02	3693.40	4006.77	1957.93	0.12	−0.92	0.79	0.17
DDX5	68.30	88.85	41.80	0.38	−0.71	0.23	0.26	74.10	90.77	80.90	0.29	0.13	0.08	0.35
β-tubulin	29.80	51.30	33.67	0.78	0.18	0.09	0.71	240.73	273.17	294.77	0.18	0.29	0.64	0.45
hprt1	26.93	47.40	20.93	0.82	−0.36	0.27	0.64	28.27	15.53	19.10	−0.86	−0.57	0.33	0.47
B2M	96.53	263.95	89.73	1.45	−0.11	0.02	0.91	200.10	100.97	95.13	−0.99	−1.07	0.02	0.02
GAPDH	2324.47	1332.75	539.83	−0.80	−2.11	0.32	0.04	0.70	0.93	0.67	0.41	−0.06	0.63	0.93

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