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Fig. 3 | BMC Genetics

Fig. 3

From: Multi-omics profiling highlights lipid metabolism alterations in pigs fed low-dose antibiotics

Fig. 3

Comparison of the transcriptome of liver samples between the LDA and CON groups. a Hierarchical clustering analyses of total gene expression levels from LDA and CON groups by the “Pvclust” algorithm. The approximately unbiased (AU) P-value (%) and bootstrap probability (BP) P-value are shown. b Scatter plot of the average expression levels of all DEGs. c Covariate analysis between the transcriptome data from the two groups. d Violin plots of expression levels from the three key DEGs (ALOX15, NNMT and CXCL10) in the two groups. Black bars indicate the boxplot, and white dots indicate the mean value. e Correlation networks of DEGs and differential lipids. Correlation analysis among them is shown in this network. The cyan blocks present DEGs and the green circles are lipids. The blue lines indicate positive correlations and the red lines are negative correlations. And lines with different degrees of thickness indicate different degrees of correlations between these DEGs and lipids

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