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Table 1 The variants with significant p-values from the meta-analysis of genome wide associations studies from two resource populations (F2 and HS; half-sib) with the trait ‘feather pecks delivered’ (FPD)

From: Meta-analyses of genome wide association studies in lines of laying hens divergently selected for feather pecking using imputed sequence level genotypes

Chr

Position (bp)

ID

p-value

Variant effect

Symbol

7

11,147,641

rs734668878

3.546E-11

intron

SPATS2L

7

33,398,007

rs13600324

1.828E-10

intron

ZEB2

7

33,397,356

rs315633354

3.791E-10

intron

ZEB2

2

35,421,866

rs794115893

7.451E-10

intergenic

KCNH8

2

35,420,998

2_35,420,998

7.451E-10

intergenic

KCNH8

2

35,422,624

rs732446499

7.451E-10

intergenic

KCNH8

2

35,422,366

2_35,422,366

7.451E-10

intergenic

KCNH8

2

35,417,854

rs733161790

7.451E-10

intergenic

KCNH8

7

32,004,828

rs317095182

8.392E-10

intron

LRP1B

13

3,974,978

rs312579842

1.336E-09

intron

FGF18

7

32,009,461

rs737373523

2.448E-09

intron

LRP1B

7

32,001,224

7_32,001,224

2.448E-09

intron

LRP1B

2

136,907,571

2_136,907,571

2.48E-09

downstream gene

MRPL13

4

31,165,304

rs732945108

4.438E-09

downstream gene

MMAA

7

33,397,298

rs16611918

4.575E-09

intron

ZEB2