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Table 1 Selection of genes frequently associated with white coat colour

From: A genome-wide scan study identifies a single nucleotide substitution in the tyrosinase gene associated with white coat colour in a red deer (Cervus elaphus) population

abbreviation

name

function

examples in ruminants

references

AGOUTI

Agouti gene

Control of melanogenesis

 

2

AP3

Adaptor protein 3

Melanosome biogenesis

 

2

ASIP

Agouti-signalling peptide

Control of melanogenesis

x

10

DCT

Dopachrome automerase

Melanin biosynthesis, different kinds of melanin

x

2,4

EDN3

Endothelin 3

Melanocyte development and migration

 

2

EDNRB

Endothelin B receptor

Melanocyte development and migration

 

2

KIT

KIT gene

Melanocyte development and migration

x

12

KITLG

Kit ligand

Melanocyte development and migration

x

13

MART-1

Melanoma antigen recognized by T-cells 1

Regulation of melanin synthesis

 

7

MC1R

Melanocortin 1 receptor

Control of melanogenesis

 

8,14

MGF

mast-cell growth factor

Control of melanogenesis

x

15

MITF

Microphthalmia-associated transcription factor

Control of melanogenesis

x

16

MITF

microphthalmia-associated transcription factor

Transcriptomic regulation

 

9

MLPH

Melanophilin

Melanosome transport

 

2

MYO5A

Myoxin, heavy polypeptide 12

Melanosome transport

 

2

P

Pink-eyed dilution gene

Melanosome biogenesis

 

6

PMEL17

premelanosome protein 17

Regulation of melanin synthesis

x

5,17

POMC1

Proopiomelanocortin 1

Control of melanogenesis

  

Rab27a

RAS-related gene 27

Melanosome transport

 

2

SILV

Silver

Melanosome biogenesis

 

2

TYR

Tyrosinase

Melanin biosynthesis, different kinds of melanin

x

1,2,3,11

TYRP1

Tyrosinase-related protein 1

Melanin biosynthesis, different kinds of melanin

x

1,2,3

  1. X: examples in ruminants available