|  |  |  |  | Overlap to haplotype entropy method |  | ||
---|---|---|---|---|---|---|---|---|
Method | Scan resolution | Dataset | Population | Gene # | Expected | Observed | χ2p -value | Ref. |
Entropy | 23 kb | HapMap2 | Caucasian | 150 | - | - | - | Â |
CLR | ~500 kb | Perlegen | Caucasian | 41 | 0.2896 | 5 | 3.8e-15 | [16] |
iHS | 100 kb | HapMap2 | Caucasian | 246 | 1.7374 | 13 | < 2.2e-16 | [5] |
iHS | 200 kb | HGPD | Caucasian | 194 | 1.3701 | 12 | < 2.2e-16 | [12] |
XP-EHH | ~800 kb-3.5 Mb | HapMap2 | Caucasian | 23 | 0.1624 | 8 | < 2.2e-16 | [6] |
XP-EHH | ~500 kb | HGPD | Caucasian | 177 | 1.2501 | 22 | < 2.2e-16 | [12] |
Entropy | 23 kb | HapMap2 | African | 170 | - | - | - | Â |
CLR | ~500 kb | Perlegen | African | 10 | 0.0800 | 2 | 4.6e-07 | [16] |
iHS | 200 kb | HGPD | African (Bantu) | 245 | 1.9610 | 14 | < 2.2e-16 | [12] |
iHS | 200 kb | HGPD | African (Biaka) | 165 | 1.3207 | 4 | 0.05595 | [12] |
iHS | 100 kb | HapMap2 | African | 262 | 2.0971 | 15 | < 2.2e-16 | [5] |
XP-EHH | 200 kb | HGPD | African (Bantu) | 400 | 3.2017 | 27 | < 2.2e-16 | [12] |
XP-EHH | 200 kb | HGPD | African (Biaka) | 425 | 3.4018 | 7 | 0.08843 | [12] |
XP-EHH | ~800 kb-3.5 Mb | HapMap2 | African | ND | - | - | - | [6] |