Gene/Expressed allele | BTA | SNP ID1 | Nucleotide position of SNP | SNP gene position | Alleles (1/2)2 | Frequency allele 1 (p)3 | Heterozygosity | Deviation from HWE |
---|---|---|---|---|---|---|---|---|
CALCR/maternal | 4 | rs42940189 | 11,049,538 | Exonic (non-syn) | G/A | 0.90 | 0.15 | < 0.001 |
 | 4 | rs42940187 | 11,039,296 | Exonic (syn) | C/T | 0.86 | 0.23 | 0.03 |
GRB10/ isoform-dependent | 4 | GRB10_p.A5394141C | 5,394,141 | Intronic | C/A | 0.95 | 0.09 | 0.11 |
 | 4 | rs43375833 | 5,334,910 | Intronic | C/T | 0.67 | 0.42 | 0.14 |
ZNF215/ maternal | 15 | rs42575466 | 44,945,003 | Exonic (syn) | G/A | 0.95 | 0.09 | < 0.00001 |
 | 15 | rs42575474 | 44,934,196 | Intronic | G/A | 0.67 | 0.43 | 0.46 |
PEG3/ paternal | 18 | PEG3_p.A64370595G | 64,370,595 | Upstream | G/A | 0.69 | 0.44 | 0.36 |
 | 18 | PEG3_p.C64367437T | 64,367,437 | Upstream | C/T | 0.66 | 0.45 | 0.81 |
 | 18 | rs17871322 | 64,362,259 | Exonic (syn) | G/A | 0.66 | 0.46 | 0.43 |
ZIM2/ paternal expression in humans; polymorphic expression in mice | 18 | rs41899915 | 64,234,488 | Exonic (syn) | C/G | 0.80 | 0.32 | 0.43 |
 | 18 | rs41899913 | 64,233,519 | 3'UTR | G/C | 0.83 | 0.28 | 0.85 |
 | 18 | rs41899911 | 64,232,216 | 3'UTR | C/T | 0.80 | 0.32 | 0.41 |
 | 18 | rs41899910 | 64,231,503 | 3'UTR | T/C | 0.70 | 0.40 | 0.28 |
RASGRF1/ paternal | 21 | RASGRF1_p.C25039690T | 25,039,690 | Intronic | A/G | 0.59 | 0.42 | < 0.001 |
PHLDA2/ maternal | 29 | rs42194502 | 50,555,723 | 3'UTR | A/T | 0.90 | 0.18 | 0.17 |
TSPAN32/ maternal | 29 | rs42637579 | 51,123,847 | Intronic | G/A | 0.63 | 0.42 | < 0.01 |
 | 29 | rs42637578 | 51,123,729 | Exonic (syn) | T/C | 0.94 | 0.11 | 0.32 |