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Table 3 Loci Genotyped in C57-F2 and CBA-F2 Crosses

From: Genome-wide linkage analyses identify Hfhl1 and Hfhl3 with frequency-specific effects on the hearing spectrum of NIH Swiss mice

Cross

Chr

Locus

Location (Mbp)

Corresponding

C3H-N2 SNP Interval

C57-F2

7

D7MIT83

59.0

rs13479325*-rs6279696

 

8

rs13479840

78.3

rs3667255-rs6296891*

  

rs13479929

97.3

rs3661882*

 

9

rs13480341

90.8

rs13480325*-rs3088463

 

10

rs13480480

7.5

CEL10_3989939*-CEL10_20959105

  

rs3089912

20.7

CEL10_20959105*-rs6391751

  

rs13480550

25.0

CEL10_20959105*-rs6391751*

  

rs13480621

59.9

rs6391751-rs3682523

  

rs29365220

81.7

rs3682523-rs8258353*

  

rs13480720

96.8

rs13480720*

  

rs13480777

115.6

rs13480720

CBA-F2

7

rs8255275

46.0

rs6228386-rs6160140

  

rs3680765

56.6

rs6160140*-rs13479325*

  

rs3719301

64.2

rs13479325-rs6279696

 

8

rs13479840

78.3

rs3667255-rs6296891*

  

rs13479916

94.3

rs6296891-rs3661882*

 

9

rs13480313

84.0

rs13480208-rs13480323*

 

10

rs3089912

20.7

CEL10_3989939-CEL10_20959105*

  

rs13480550

25.0

CEL10_20959105*-rs6391751*

  

rs13480581

38.7

rs6391751-rs3682523

  

rs13480652

74.1

rs3682523*-rs8258353

  

rs13480720

96.8

rs13480720*

  

rs13480777

115.6

rs13480720

  1. * SNP is within 5 Mbp of the SNP evaluated in the C57-F2 or CBA-F2 population. Chr, chromosome; Mbp, mega base pairs.