From: Genomic complexity of the variable region-containing chitin-binding proteins in amphioxus
Haplotype genes | Genomic scaffold BAC/PAC support | Alleles |
---|---|---|
Haplotype A | Scaffold_82; _869 | Â |
   VCBP 5a | BAC 63n5-43b24 contig | VCBP5S2*01 |
   VCBP 2b | BAC 63n5-43b24 contig | VCBP2S1*02 |
   VCBP 5b | BAC 63n5-43b24 contig | VCBP5S1*02 |
   VCBP 4a | BAC 100j9 | VCBP4S1*02 |
   VCPB 1a | BAC 100j9 | VCBP1S1*02 |
   VCBP 1b | Note1 | VCBP1S3*01 |
   VCBP 1c |  | VCBP1S2*01 |
Haplotype B | Scaffold_295 | Â |
   VCBP 5a | BAC 62d19 | VCBP5S2*02 |
   VCBP 2b | BAC 62d19 | VCBP2S1*03 |
   VCBP 5b | BAC 62d19 | VCBP5S1*03 |
   VCBP 4a | BAC 5h9 | VCBP4S1*04 |
   VCBP 1a | BAC 5h9 | VCBP1S1*03 |
   VCBP 1d | Note2 | VCBP1S4*01 |
Haplotype C | Independent animal | Â |
   VCBP 5a | PAC 37d15 | VCBP5S2*03 |
   VCBP 2b | PAC 37d15 | VCBP2S1*04 |
   VCBP 5b | PAC 37d15 | VCBP5S1*04 |
   VCBP 2a | PAC 37d15 | VCBP2S2*01 |
Haplotype A/B: VCBP3 | Scaffold_1 | Â |
   VCBP3 | BAC 90F15 | VCBP3S1*02 |
   VCBP3 | BAC 54h3 | VCBP3S1*03 |
Haplotype X | Independent animal | Â |
   VCBP3 | PAC 30b18 | VCBP3S1*04 |