Table 2 SNPs on chromosome 15 having a P-value less than 1.0E-04 from the conditional GWAS where MARC0083357 was included as a covariate in the model
Original GWAS | Conditional GWAS | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
SNP | Position | MAF | CR | A | b1 | P-value1 | b2 | P-value2 | b1 | P-value1 |
ALGA0112278 | 58515874 | 0.06 | 1.00 | G | -3.61E-02 | 1.70E-06 | -3.86E-02 | 1.54E-13 | -2.73E-02 | 1.81E-04 |
ASGA0106157 | 58532159 | 0.06 | 1.00 | A | -3.61E-02 | 1.70E-06 | -3.86E-02 | 1.54E-13 | -2.73E-02 | 1.81E-04 |
MARC0098560 | 58565300 | 0.06 | 0.99 | A | -3.51E-02 | 3.65E-06 | -3.82E-02 | 2.79E-13 | -2.63E-02 | 3.43E-04 |
ASGA0069653 | 60473765 | 0.06 | 0.99 | A | -3.72E-02 | 1.04E-06 | -3.87E-02 | 3.96E-13 | -2.85E-02 | 1.10E-04 |
ASGA0070395 | 123808149 | 0.34 | 1.00 | A | 7.93E-03 | 4.49E-02 | -4.49E-02 | 1.97E-17 | 1.35E-02 | 3.76E-04 |
DRGA0015455 | 126739060 | 0.42 | 0.98 | C | -4.74E-03 | 2.31E-01 | -4.66E-02 | 3.96E-17 | -1.29E-02 | 8.94E-04 |
ASGA0070433 | 127982302 | 0.34 | 1.00 | A | -7.91E-03 | 4.79E-02 | -4.47E-02 | 2.86E-17 | -1.32E-02 | 5.80E-04 |
ALGA0086908 | 129397699 | 0.49 | 1.00 | G | 3.71E-03 | 3.36E-01 | -4.79E-02 | 3.29E-18 | 1.42E-02 | 2.29E-04 |
MARC0099288 | 129429610 | 0.49 | 0.99 | G | 4.04E-03 | 2.95E-01 | -4.76E-02 | 6.73E-18 | 1.44E-02 | 1.85E-04 |
MARC0105925 | 129430060 | 0.32 | 1.00 | G | 2.22E-02 | 2.71E-07 | -3.77E-02 | 8.58E-13 | 1.56E-02 | 2.01E-04 |
ALGA0086957 | 130765546 | 0.42 | 0.99 | C | 3.04E-03 | 4.12E-01 | -4.67E-02 | 1.74E-17 | 1.26E-02 | 6.32E-04 |