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  1. Content type: Research article

    Auxins play an important role in plant growth and development; the auxins responsive gene; auxin/indole-3-acetic acid (Aux/IAA), small auxin-up RNAs (SAUR) and Gretchen Hagen3 (GH3) control their mechanisms. The

    Authors: Joy Nyangasi Kirungu, Richard Odongo Magwanga, Pu Lu, Xiaoyan Cai, Zhongli Zhou, Xingxing Wang, Renhai Peng, Kunbo Wang and Fang Liu

    Citation: BMC Genetics 2019 20:62

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  2. Content type: Research article

    The ornamental crop Hydrangea macrophylla develops highly attractive lacecap (wild type) or mophead inflorescences. The mophead trait, which is mostly favored by consumers, is recessively inherited by the INFLORE...

    Authors: Conny Tränkner, Jörg Krüger, Stefan Wanke, Julia Naumann, Torsten Wenke and Frauke Engel

    Citation: BMC Genetics 2019 20:60

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  3. Content type: Research article

    Association studies in recently admixed populations are extremely useful to identify the genetic architecture of pigmentation, due to their high genotypic and phenotypic variation. However, to date only four G...

    Authors: Frida Lona-Durazo, Natalia Hernandez-Pacheco, Shaohua Fan, Tongwu Zhang, Jiyeon Choi, Michael A. Kovacs, Stacie K. Loftus, Phuong Le, Melissa Edwards, Cesar A. Fortes-Lima, Celeste Eng, Scott Huntsman, Donglei Hu, Enrique Javier Gómez-Cabezas, Lilia Caridad Marín-Padrón, Jonas Grauholm…

    Citation: BMC Genetics 2019 20:59

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  4. Content type: Research article

    Ketosis in dairy cattle has been shown to cause a high morbidity in the farm and substantial financial losses to dairy farmers. Ketosis symptoms, however, are difficult to identify, therefore, the amount of ke...

    Authors: S. Nayeri, F. Schenkel, A. Fleming, V. Kroezen, M. Sargolzaei, C. Baes, A. Cánovas, J. Squires and F. Miglior

    Citation: BMC Genetics 2019 20:58

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  5. Content type: Research article

    Ticks are a problem for cattle production mainly in tropical and subtropical regions, because they generate great economic losses. Acaricides and vaccines have been used to try to keep tick populations under c...

    Authors: S. G. Martínez-Arzate, J. C. Sánchez-Bermúdez, S. Sotelo-Gómez, H. M. Diaz-Albiter, W. Hegazy-Hassan, E. Tenorio-Borroto, A. Barbabosa-Pliego and J. C. Vázquez-Chagoyán

    Citation: BMC Genetics 2019 20:56

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  6. Content type: Research article

    Apogamy is a unique asexual reproduction in the ferns, in which somatic cells of gametophytes go through dedifferentiation and then differentiate into haploid sporophytes bypassing fertilization. Restricted to...

    Authors: Qi Fu and Long-qing Chen

    Citation: BMC Genetics 2019 20:55

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  7. Content type: Research article

    Overgrazing is a major factor that causes steppe degradation in Inner Mongolian, resulting in extensive ecosystem damage. Scarcity of grass means sheep are smaller and therefore mutton and cashmere production ...

    Authors: Weibo Ren, Warwick Badgery, Yong Ding, Huiqin Guo, Yang Gao and Jize Zhang

    Citation: BMC Genetics 2019 20:54

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  8. Content type: Research article

    We previously conducted a genome-wide association study (GWAS) strategy for milk fatty acids in Chinese Holstein, and identified 83 genome-wide significant single nucleotide polymorphisms (SNPs) and 314 sugges...

    Authors: Lijun Shi, Xiaoqing Lv, Lin Liu, Yuze Yang, Zhu Ma, Bo Han and Dongxiao Sun

    Citation: BMC Genetics 2019 20:53

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  9. Content type: Research article

    Genetic diversity is known to confer survival advantage in many species across the tree of life. Here, we hypothesize that such pattern applies to humans as well and could be a result of higher fitness in indi...

    Authors: Ke Xu, Roman Kosoy, Khader Shameer, Sudhir Kumar, Li Liu, Ben Readhead, Gillian M. Belbin, Hao-Chih Lee, Rong Chen and Joel T. Dudley

    Citation: BMC Genetics 2019 20:52

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  10. Content type: Research article

    Various biological materials unrelated to humans are found at crime scenes and it is often important to elucidate the origin of these materials. A genetic locus common to several species is conventionally PCR-...

    Authors: Takako Kinebuchi, Nozomi Idota, Hajime Tsuboi, Marin Takaso, Risa Bando and Hiroshi Ikegaya

    Citation: BMC Genetics 2019 20:50

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  11. Content type: Research article

    Microsatellite loci have been used extensively over the past two decades to study the genetic characteristics of non-model species. The ease of microsatellite development and ability to adapt markers from rela...

    Authors: William L. Miller, Jessie Edson, Peter Pietrandrea, Cassandra Miller-Butterworth and W. David Walter

    Citation: BMC Genetics 2019 20:49

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  12. Content type: Research article

    We have previously identified 11 promising candidate genes for milk composition traits by resequencing the whole genomes of 8 Holstein bulls with extremely high and low estimated breeding values for milk prote...

    Authors: Jianping Jiang, Lin Liu, Yahui Gao, Lijun Shi, Yanhua Li, Weijun Liang and Dongxiao Sun

    Citation: BMC Genetics 2019 20:48

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  13. Content type: Research article

    Fusarium head blight (FHB) is a problem of great concern in small grain cereals, especially wheat. A quantitative trait locus (QTL) for FHB resistance (FHB_SFI) located on the long arm of chromosome 2D in the spr...

    Authors: Xinkun Hu, Hélène Rocheleau, Curt McCartney, Chiara Biselli, Paolo Bagnaresi, Margaret Balcerzak, George Fedak, Zehong Yan, Giampiero Valè, Shahrokh Khanizadeh and Thérèse Ouellet

    Citation: BMC Genetics 2019 20:47

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  14. Content type: Research article

    Single-nucleotide polymorphisms (SNPs) in microRNAs (miRNAs) and their target binding sites affect miRNA function and are involved in biological processes and diseases, including bovine mastitis, a frequent in...

    Authors: Qiang Jiang, Han Zhao, Rongling Li, Yaran Zhang, Yong Liu, Jinpeng Wang, Xiuge Wang, Zhihua Ju, Wenhao Liu, Minghai Hou and Jinming Huang

    Citation: BMC Genetics 2019 20:46

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  15. Content type: Research article

    Sesame (Sesamum indicum) can accumulate over 60% oil in its seed. However, low oil content genotypes with an oil content of less than 50% are also observed. To gain insights into how genes shape this variation, w...

    Authors: Linhai Wang, Yanxin Zhang, Donghua Li, Komivi Dossa, Ming Li Wang, Rong Zhou, Jingyin Yu and Xiurong Zhang

    Citation: BMC Genetics 2019 20:45

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  16. Content type: Research article

    In Atlantic salmon in the wild, age at maturity is strongly influenced by the vgll3 locus. Under farming conditions, light, temperature and feeding regimes are known significantly advance or delay age at maturity...

    Authors: Fernando Ayllon, Monica F. Solberg, Kevin A. Glover, Faezeh Mohammadi, Erik Kjærner-Semb, Per Gunnar Fjelldal, Eva Andersson, Tom Hansen, Rolf B. Edvardsen and Anna Wargelius

    Citation: BMC Genetics 2019 20:44

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  17. Content type: Research article

    Cabbage (Brassica oleracea var. capitata) is popular worldwide for consumption as a leafy vegetable. Premature flowering is triggered by low temperature, and deteriorates quality of cabbage as vegetable. In gener...

    Authors: Md. Abuyusuf, Ujjal Kumar Nath, Hoy-Taek Kim, Md. Rafiqul Islam, Jong-In Park and Ill-Sup Nou

    Citation: BMC Genetics 2019 20:42

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  18. Content type: Research article

    The basic leucine zipper (bZIP) transcription factor is one of the most abundant and conserved transcription factor families. In addition to being involved in growth and development, bZIP transcription factors...

    Authors: Zhengmei Yang, Jian Sun, Yao Chen, Panpan Zhu, Lei Zhang, Shaoyuan Wu, Daifu Ma, Qinghe Cao, Zongyun Li and Tao Xu

    Citation: BMC Genetics 2019 20:41

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  19. Content type: Research article

    The 100-pod fresh weight (PFW), 100-seed fresh weight (SFW), 100-seed dry weight (SDW) and moisture content of fresh seeds (MCFS) at the R6 stage are crucial factors for vegetable soybean yield. However, the g...

    Authors: Xiangnan Li, Xiaoli Zhang, Longming Zhu, Yuanpeng Bu, Xinfang Wang, Xing Zhang, Yang Zhou, Xiaoting Wang, Na Guo, Lijuan Qiu, Jinming Zhao and Han Xing

    Citation: BMC Genetics 2019 20:39

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  20. Content type: Research article

    Stripe rust is a serious fungal disease of wheat (Triticum aestivum L.) caused by Puccinia striiformis f. sp. tritici (Pst), which results in yield reduction and decreased grain quality. Breeding for genetic resi...

    Authors: Fangjie Yao, Xuemei Zhang, Xueling Ye, Jian Li, Li Long, Can Yu, Jing Li, Yuqi Wang, Yu Wu, Jirui Wang, Qiantao Jiang, Wei Li, Jian Ma, Yuming Wei, Youliang Zheng and Guoyue Chen

    Citation: BMC Genetics 2019 20:38

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  21. Content type: Research article

    In Malaysia, the domestic water buffaloes (Bubalus bubalis) are classified into the swamp and the murrah buffaloes. Identification of these buffaloes is usually made via their phenotypic appearances. This study c...

    Authors: Nor ‘ Ammar Liyana Shaari, Marilyn Jaoi-Edward, Shu San Loo, Mohd Shahrom Salisi, Rosnina Yusoff, Nurul Izza Ab Ghani, Mohd Zamri Saad and Hafandi Ahmad

    Citation: BMC Genetics 2019 20:37

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  22. Content type: Research article

    Heat shock proteins 90 (HSP90s) are a highly conserved protein family of cellular chaperones widely found in plants; they play a fundamental role in response to biotic and abiotic stresses. The genome-wide ana...

    Authors: Zhaopeng Song, Feilong Pan, Chao Yang, Hongfang Jia, Houlong Jiang, Fan He, Najia Li, Xiaochong Lu and Hongying Zhang

    Citation: BMC Genetics 2019 20:35

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  23. Content type: Research article

    Improving the gelatinization temperature (GT), gel consistency (GC) and amylose content (AC) for parental grain eating and cooking qualities (ECQs) are key factors for enhancing average grain ECQs for hybrid j...

    Authors: Hui Wang, Shangshang Zhu, Xiaojing Dang, Erbao Liu, Xiaoxiao Hu, Moaz Salah Eltahawy, Imdad Ullah Zaid and Delin Hong

    Citation: BMC Genetics 2019 20:34

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  24. Content type: Research

    Expression of the CNDP2 gene is frequently up- or down-regulated in different types of human cancers. However, how the product of this gene is involved in cell growth and proliferation is poorly understood. Moreo...

    Authors: Evgeniya N. Andreyeva, Anna A. Ogienko, Tatiana D. Dubatolova, Anastasiya L. Oshchepkova, Elena N. Kozhevnikova, Anton V. Ivankin, Gera A. Pavlova, Sergei A. Kopyl and Alexey V. Pindyurin

    Citation: BMC Genetics 2019 20(Suppl 1):31

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    This article is part of a Supplement: Volume 20 Supplement 1

  25. Content type: Research

    Flavonoid compounds are secondary plant metabolites, having a functional importance in plant development, protection from pathogens and unfavorable environmental factors. Chalcone synthase (CHS) is a key enzym...

    Authors: Anastasia Y. Glagoleva, Nikita V. Ivanisenko and Elena K. Khlestkina

    Citation: BMC Genetics 2019 20(Suppl 1):30

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    This article is part of a Supplement: Volume 20 Supplement 1

  26. Content type: Research

    The natural variation of starch phosphate content in potatoes has been previously reported. It is known that, in contrast to raw starch, commercially phosphorylated starch is more stable at high temperatures a...

    Authors: Vadim K. Khlestkin, Irina V. Rozanova, Vadim M. Efimov and Elena K. Khlestkina

    Citation: BMC Genetics 2019 20(Suppl 1):29

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    This article is part of a Supplement: Volume 20 Supplement 1

  27. Content type: Research

    The cultivated potato Solanum tuberosum L. is the fourth most important crop worldwide. Anthocyanins synthesis and accumulation in potato tissues are considered as one of important traits related to stress resist...

    Authors: Ksenia V. Strygina, Alex V. Kochetov and Elena K. Khlestkina

    Citation: BMC Genetics 2019 20(Suppl 1):27

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    This article is part of a Supplement: Volume 20 Supplement 1

  28. Content type: Research

    Design of new highly productive livestock breeds, well-adapted to local climatic conditions is one of the aims of modern agriculture and breeding. The genetics underlying economically important traits in cattl...

    Authors: Alexander V. Igoshin, Andrey A. Yurchenko, Nadezhda M. Belonogova, Dmitry V. Petrovsky, Ruslan B. Aitnazarov, Vladimir A. Soloshenko, Nikolay S. Yudin and Denis M. Larkin

    Citation: BMC Genetics 2019 20(Suppl 1):26

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    This article is part of a Supplement: Volume 20 Supplement 1

  29. Content type: Research article

    The genus Ostrya (Betulaceae) contains eight species and four of them are distributed in China. However, studies based on limited informative sites of several chloroplast markers failed to resolve interspecific d...

    Authors: Yanyou Jiang, Yongzhi Yang, Zhiqiang Lu, Dongshi Wan and Guangpeng Ren

    Citation: BMC Genetics 2019 20:33

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  30. Content type: Research article

    Aflatoxin contamination caused by Aspergillus flavus is a major constraint to peanut industry worldwide due to its toxicological effects to human and animals. Developing peanut varieties with resistance to seed i...

    Authors: Bolun Yu, Dongxin Huai, Li Huang, Yanping Kang, Xiaoping Ren, Yuning Chen, Xiaojing Zhou, Huaiyong Luo, Nian Liu, Weigang Chen, Yong Lei, Manish K. Pandey, Hari Sudini, Rajeev K. Varshney, Boshou Liao and Huifang Jiang

    Citation: BMC Genetics 2019 20:32

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  31. Content type: Research article

    High isoelectric point α-amylase genes (Amy1) play major roles during cereal seed germination, and are associated with unacceptable high residual α-amylase activities in ripe wheat grains. However, in wheat and b...

    Authors: Liangliang Ju, Guangbing Deng, Junjun Liang, Haili Zhang, Qiao Li, Zhifen Pan, Maoqun Yu and Hai Long

    Citation: BMC Genetics 2019 20:25

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  32. Content type: Research article

    The inheritance of different coat colours in the Cane Corso Italiano dog has not been described thus far. We analysed data from 23,271 dogs and bitches using the Cane Corso Italiano Pedigree Database. We are d...

    Authors: Evžen Korec, Matyáš Hančl, Marie Bydžovská, Ondřej Chalupa and Jana Korcová

    Citation: BMC Genetics 2019 20:24

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  33. Content type: Research article

    Common wheat (Triticum aestivum L.) is one of the most important food crops worldwide. Wheat spike-layer uniformity related traits (SLURTs) were complex traits that directly affect yield potential and appearance....

    Authors: Chunhua Zhao, Na Zhang, Yongzhen Wu, Han Sun, Cheng Liu, Xiaoli Fan, Xuemei Yan, Hongxing Xu, Jun Ji and Fa Cui

    Citation: BMC Genetics 2019 20:23

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  34. Content type: Research article

    The collection and analysis of fecal DNA is a common practice, especially when dealing with wildlife species that are difficult to track or capture. While fecal DNA is known to be lower quality than traditiona...

    Authors: David Forgacs, Rick L. Wallen, Amy L. Boedeker and James N. Derr

    Citation: BMC Genetics 2019 20:22

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  35. Content type: Research article

    It becomes clear that the increase in the density of marker panels and even the use of sequence data didn’t result in any meaningful increase in the accuracy of genomic selection (GS) using either regression (...

    Authors: Ling-Yun Chang, Sajjad Toghiani, Samuel E. Aggrey and Romdhane Rekaya

    Citation: BMC Genetics 2019 20:21

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  36. Content type: Research article

    The observation that many alien species become invasive despite low genetic diversity has long been considered the ‘genetic paradox’ in invasion biology. This paradox is often resolved through the temporal bui...

    Authors: Kenny Helsen, Jenny Hagenblad, Kamal P. Acharya, Jörg Brunet, Sara A. O. Cousins, Guillaume Decocq, Pieter De Frenne, Adam Kimberley, Annette Kolb, Jana Michaelis, Jan Plue, Kris Verheyen, James D. M. Speed and Bente J. Graae

    Citation: BMC Genetics 2019 20:20

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  37. Content type: Research article

    A genome-wide mapping study using male F2 zinc transporter 7-knockout mice (znt7-KO) and their wild type littermates in a mixed 129P1/ReJ (129P1) and C57BL/6J (B6) background identified a quantitative trait locus...

    Authors: L. Huang, S. Tepaamorndech, C. P. Kirschke, Y. Cai, J. Zhao, Xiaohan Cao and Andrew Rao

    Citation: BMC Genetics 2019 20:19

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  38. Content type: Research article

    An STR locus with tri-allelic pattern is occasionally observed in routine forensic casework. The extra copy of TPOX locus with tri-allelic pattern in populations has been assumed to be inserted into an X chrom...

    Authors: Qinrui Yang, Baonian Liu, Chengchen Shao, Yuxiang Zhou, Yining Yao, Yuyin Pan, Kuan Sun, Hongmei Xu, Chengtao Li, Ting Wei, Yueqin Zhou, Qiqun Tang and Jianhui Xie

    Citation: BMC Genetics 2019 20:18

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  39. Content type: Research article

    Both classes of transposable elements (DNA and RNA) are tightly regulated at the transcriptional level leading to the inactivation of transposition via epigenetic mechanisms. Due to the high copies number of t...

    Authors: Sylvaine Renault, Murielle Genty, Alison Gabori, Catherine Boisneau, Charles Esnault, Thomas Dugé de Bernonville and Corinne Augé-Gouillou

    Citation: BMC Genetics 2019 20:17

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  40. Content type: Research article

    Glucocorticoids are commonly used in the clinical setting for their potent anti-inflammatory effects; however, significant variations in response to treatment have been demonstrated. Although the underlying m...

    Authors: Stacey M. Leventhal, Debora Lim, Tajia L. Green, Anna E. Cantrell, Kiho Cho and David G. Greenhalgh

    Citation: BMC Genetics 2019 20:16

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  41. Content type: Methodology article

    Genome-wide association studies (GWAS) have been successfully implemented in cattle research and breeding. However, moving from the associations to identify the causal variants and reveal underlying mechanisms...

    Authors: Zexi Cai, Bernt Guldbrandtsen, Mogens Sandø Lund and Goutam Sahana

    Citation: BMC Genetics 2019 20:15

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  42. Content type: Research article

    Whey acidic protein (WAP) is a major protein identified in the milk of several mammalian species with cysteine-rich domains known as four-disulfide cores (4-DSC). The organization of the eutherian WAP genes is...

    Authors: Alma Ryskaliyeva, Céline Henry, Guy Miranda, Bernard Faye, Gaukhar Konuspayeva and Patrice Martin

    Citation: BMC Genetics 2019 20:14

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  43. Content type: Research article

    Arapaima gigas (Schinz, 1822) is the largest freshwater scaled fish in the world, and an emerging species for tropical aquaculture development. Conservation of the species, and the expansion of aquaculture requir...

    Authors: Lucas Simon Torati, John Bernard Taggart, Eduardo Sousa Varela, Juliana Araripe, Stefanie Wehner and Hervé Migaud

    Citation: BMC Genetics 2019 20:13

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  44. Content type: Research article

    Sexual precocity is a common biological phenomenon in animal species. A large number of precocity individuals were identified in Chinese mitten crab Eriocheir sinensis, which caused huge economic loss annually. H...

    Authors: Xiaowen Chen, Jun Wang, Xin Hou, Wucheng Yue, Shu Huang and Chenghui Wang

    Citation: BMC Genetics 2019 20:12

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