Table 1 Primer sequences and amplification product sizes.
From: Monoallelic maternal expression of STAT5A affects embryonic survival in cattle
Primer | Sequence | Product size (bp) | SNP (nucleotide number)1 |
|---|---|---|---|
5PSTAT5-3F 5PSTAT5-4R | CTGTAGTTGTCCCTGCAGAAG CTGTGTCAGCCTCACCCTCTC | 840 | 134357 |
5PSTAT5-5F 5PSTAT5-6R | GAGAGGGTGAGGCTGACACAG CTGAGGCATGCAGACTCTTAG | 921 | 134828; 134920; 135162; 135249; 135397 |
5PSTAT5-11F 5PSTAT5-12R | CACGGAGATACTTCCTGGAAGG TGAACCGTGGCACACTCGTG | 840 | 137887; 138012 |
5PSTAT5-13F 5PSTAT5-14R | CACGAGTGTGCCACGGTTCAG CCAAACATCTGGCTGGGTTG | 940 | 138242; 138299; 138337; 137338; 138596; 138653 |
SPSTAT3-21F 5PSTAT3-21R | CTTAAGAACTGGGGTTCCCGG CTGCTCTCCTGAATATATGC | 681 | 197390; 197429; 197456; 197558; 197602; 197608; 197713; 197718; 197740 |
STAT3F8 STAT3R8 | TCCCCCAAGGATCCTACG CCATAGTACCAGACAACTGG | 420 | 171005 |
STAT3F12 STAT3R12 | CACCCCCTGCATTGGAAGCG CTTCTACTTGAGCATGTACAGGG | 653 | 177338 |
STAT3F12A STAT3R12A | CTCTCCTGCTCAGCTACATC GGACTTTCAAAGAGACTCGG | 469 | 177338 |
STATF1 STATR1 | GAGAAGTTGGCGGAGATTATC CCGTGTGTCCTCATCACCTG | 820 | 153137 |
STAT14 STAT13 | GAGGAGATGCTGGCTGAGGT TTCAGGGGACAGGACTCTGG | 440 | 153137 |
STAT14 (exon8) STAT11 (exon 11) | GAGGAGATGCTGGCTGAGGT CCGGTCAGCTCGCTTGATCC | 360 | 153137 |
STAT3-1 (exon 13) STAT3-2 (exon 9) | ACCGCATCTCTGCTCTCTCAG GCCATTAGTCATCAAGACCG | 253 | 177338 |
b-actin F b-actin R | CAGCACAATGAAGATCAAGATCATC AAAGGGTGTAACGCAGCTAACAGT | 191 |