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Table 4 Primers used in this study

From: Novel mutations in TLR genes cause hyporesponsiveness to Mycobacterium avium subsp. paratuberculosis infection

Gene

Sequence (5'-3')

Amplicon length (bp)

Annealing temperature (°C)

IS900- MAP (external)

F-AGGGTGTTCGGGGCCGTCGCTTAG

R-TGAGGTCGATCGCCCACGTGACCT

406

56.5

IS900-MAP (internal)

F-ATGTGGTTGCTGTGTTGGATGG

R-CCGCCGCAATCAACTCCAG

298

63.0

TLR1

F-GGAGATACTTATGGGGAAAGAGAA

R-GTGTATAGACAAGGCCTTCAGTGA

402

52.0

TLR2

F-CAGGAGCTGGAGCACTTGTACC

R-GTCTCATCCACGGGCCAGACCA

362

56.0

TLR4

F-GGGACTGTGCAACCTGACCA

R-GCTCTAAGCCCATGAAGTTTGAA

434

53.0

IL-4

F-CCCAGCGCTGGTCTGCTTACT

R-GCTTGCCAGGCTGCTGAGATT

283

57.4

IL-8

F-TTGGCCGCTTTCCTGCTCT

R-AAATGCCTGCACAACCTTCTGC

249

55.2

IL-10

F-AGCCGAGATGCCAGCACCCTGTC

R-AGCTTCTCCCCCAGCGAGTTCACG

293

61.0

IL-12p35

F-GAGCCTGCCCACCACCACA

R-GGAAGCCAGGCAACTCTCATT

226

56.4

IFN-γ

F-CTAAGGGTGGGCCTCTTTTCTC

R-CATCCACCGGAATTTGAATCAG

237

53.2

β-actin

F-ACTGGGACGACATGGAGAG

R-AGGAAGGAAGGCTGGAAGAG

568

54.0