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Table 3 Results on Type I error rate of haplo.score

From: Impact of genotyping errors on the type I error rate and the power of haplotype-based association methods

Mean error rate per locus (%)

Nondifferential

Differential (errors only in cases)

Differential (cases: first 7 markers, controls: last 7 markers)

Without errors

0.047

  

0.2

0.047

0.384

0.057

8

0.049

1

0.333

15.6

0.037

1

0.973

  1. Type I error rate of the haplotype based score test (haplo.score) for the unrestricted model with different mean error rates per locus.
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BMC Genomic Data

ISSN: 2730-6844

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