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Table 1 Mean, standard deviation (SD), and range for MAF and FST by SNP function

From: Disparities in allele frequencies and population differentiation for 101 disease-associated single nucleotide polymorphisms between Puerto Ricans and non-Hispanic whites

SNP function Number of SNPs Puerto Rican non-Hispanic white
   Mean (SD) MAF Mean (SD) FST Range FST Mean (SD) MAF Mean (SD) FST Range FST
3'UTR 5 0.20 (0.10) 0.022 (0.050) 0.112 0.19 (0.14) 0.050 (0.067) 0.141
Intron 37 0.31 (0.13) 0.019 (0.029) 0.131 0.29 (0.13) 0.019 (0.032) 0.134
Non-Synonymous 27 0.15 (0.10)1 0.041 (0.061) 0.255 0.16 (0.12)2 0.033 (0.053) 0.166
Promoter 22 0.30 (0.15) 0.022 (0.061) 0.290 0.27 (0.15) 0.033 (0.058) 0.250
Synonymous 8 0.28 (0.14) 0.036 (0.061) 0.177 0.32 (0.18) 0.013 (0.029) 0.085
  1. 1 Significantly different from Puerto Rican intron (p < 0.001), promoter (p = 0.001), synonymous SNPs (p = 0.015)
  2. 2 Significantly different from NHW intron (p < 0.001), promoter (p = 0.014), synonymous SNPs (p = 0.027)