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Table 2 Significant SNP markers at the ITGA11 gene region associated with tick burden

From: Haplotypes that include the integrin alpha 11 gene are associated with tick burden in cattle

Locus Sample1 N2 p03 R2 4 α5 SE6 p-value
rs29025985 DTE 812 0.68 0.0075 -0.131 0.053 0.0135
rs29025981 DTE 859 0.32 0.0091 0.147 0.053 0.0052
ss161109814 DTE 1037 0.40 0.0053 0.109 0.046 0.0188
  BRM 526 0.06 0.0115 -0.309 0.125 0.0140
ss161109797 BRM 526 0.05 0.0105 -0.332 0.141 0.0188
rs29023635 DTE 914 0.69 0.0069 -0.127 0.05 0.0119
rs29023639 COM 181 0.01 0.0244 -1.476 0.698 0.0359
rs29014770 BRM 544 0.99 0.0085 0.601 0.279 0.0317
  1. 1 DTE - dairy tick experiment, BRM - Brahman, COM - Tropical Composite.
  2. 2 Number of individuals tested.
  3. 3 Frequency of the allele closer to A in the alphabet.
  4. 4 Proportion of residual variance explained.
  5. 5 Allele substitution effect in phenotypic standard deviations (tick count for the DTE and tick score for BRM and COM).
  6. 6 Standard error of α.