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Table 3 Linear mixed model analysis of faeces rumen experiment

From: High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing

Source of variation

DPI_rumen

JGI_rumen

Sample Type

28.68% ***

31.56% ***

Host Animal

0.85% ***

0.65% ***

Contig

20.65%

25.70%

Error

49.81%

42.09%

  1. A linear mixed model (Yijk = μ + sample typei + contigj + animalk + eijk) was fitted to the read using ASReml [21] count data, where Y = logn transformed counts, position = the position within the rumen that the sample was from, animal = the host animal that samples were taken from.*** p < 0.00001.
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BMC Genomic Data

ISSN: 2730-6844

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