Genome-level identification, gene expression, and comparative analysis of porcine β-defensin genes

BMC Genomic Data

Table 2 Identified nucleotide polymorphisms in the porcine β-defensin exon 2 region

Gene	SNP position^a	Nucleotide	Amino acid^b	RFLP	MAF^c
pBD1	171	A/G	/	BstN I	0.177
pBD4	65	G/A	R/K	EcoR V	0.451
pBD113	114	A/G	/	-	0.029
pBD114	186	G/A	/	-	0.09
pBD115	144	A/T	Q/H	-	0.057
pBD115	291	G/A	/	-	0.043
pBD121	96	G/A	/	Pci I	0.2
pBD133	196	A/C	K/Q	-	0.043

^a The numbering starts from the translation start codon.
^b Nonsynonymous changes are indicated by single letter code.
^c MAF, minor allele frequency; 35 pigs of 7 breeds (Landrace, Yorkshire, Berkshire, Duroc, Korean Native Pig, Seoul National University miniature Pig, and NIH miniature pig) were used for genotyping.

ISSN: 2730-6844