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Table 2 List of genes within the 1 Mb region surrounding the most significant SNP (rs133012258)

From: Genome-wide association study for birth weight in Nellore cattle points to previously described orthologous genes affecting human and bovine height

Gene Ensembl ID BTA14 coordinates Distance from SNP (kb) Strand HSA8 homology SSA4 homology MMA4 homology Description
U6 ENSBTAG00000043923 25492090:25492184 115.4 + No homologues No homologues No homologues U6 spliceosomal RNA
PENK ENSBTAG00000004924 25218586:25222991 153.8 - ENSG00000181195 ENSSSCG00000006243 ENSMUSG00000045573 Proenkephalin-A
IMPAD1 ENSBTAG00000015637 25544907:25560879 168.1 - ENSG00000104331 ENSSSCG00000006242 ENSMUSG00000066324 Inositolmonophosphatase 3
SDR16C6 ENSBTAG00000040321 25153583:25179651 197.2 - No homologues No homologues ENSMUSG00000071019 Short-chain dehydrogenase/reductase family 16C member 6
SDR16C5 (RDHE2) ENSBTAG00000018570 25105062:25117554 259.3 - ENSG00000170786 ENSSSCG00000006245 ENSMUSG00000028236 Epidermal retinol dehydrogenase 2
Unknown ENSBTAG00000039031 25067486:25067823 309.0 - No homologues No homologues No homologues Uncharacterizedprotein
CHCHD7 ENSBTAG00000033284 25052885:25058779 318.0 + ENSG00000170791 ENSSSCG00000006246 ENSMUSG00000042198 Coiled-coil-helix-coiled-coil-helix domain-containing protein 7
PLAG1 ENSBTAG00000004022 25007291:25009296 367.5 - ENSG00000181690 ENSSSCG00000006247 ENSMUSG00000003282 Pleiomorphic adenoma gene 1
MOS ENSBTAG00000019145 24975950:24976948 399.9 - ENSG00000172680 ENSSSCG00000006248 ENSMUSG00000078365 V-mosMoloneymurine sarcoma viral oncogenehomolog
U1 ENSBTAG00000028889 24970516:24970679 406.1 + No homologues No homologues No homologues U1 spliceosomal RNA
RPS20 ENSBTAG00000019147 24955079:24956324 420.5 - ENSG00000008988 ENSSSCG00000006249 ENSMUSG00000028234 40S ribosomalprotein S20
snoU54 ENSBTAG00000045097 24955769:24955835 421.0 - No homologues No homologues No homologues Small nucleolar RNA U54
LYN ENSBTAG00000020034 24847257:24920713 456.1 + ENSG00000254087 ENSSSCG00000006250 ENSMUSG00000042228 Tyrosine-proteinkinaseLyn