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Table 6 The pathways for 14 genes containing significant SNPs for one feed efficiency trait

From: Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle

Pathway Genes
bta04010: MAPK signalling pathway 282032 (RASA1), 282411 (CACNA1G), 533815 (STK3)
bta01100: Metabolic pathways 280951 (TYR), 532545 (GALNT13), 540113 (ATP6V1E2)
bta04930: Type II diabetes mellitus 282411 (CACNA1G), 538996 (ABCC8)
bta04145: Phagosome 512287 (LOC512287), 540113 (ATP6V1E2)
bta02010: ABC transporters 536203 (ABCG2), 538996 (ABCC8)
bta04976: Bile secretion 536203 (ABCG2)
bta03013: RNA transport 616055 (CHADL)
bta03022: Basal transcription factors 509259 (GTF2F2)
bta04962: Vasopressin-regulated water reabsorption 512287 (LOC512287)
bta05132: Salmonella infection 512287 (LOC512287)
bta04514: Cell adhesion molecules (CAMs) 529759 (SDC1)
bta04512: ECM-receptor interaction 529759 (SDC1)
bta05144: Malaria 529759 (SDC1)
bta04966: Collecting duct acid secretion 540113 (ATP6V1E2)
bta04721: Synaptic vesicle cycle 540113 (ATP6V1E2)
bta00190: Oxidative phosphorylation 540113 (ATP6V1E2)
bta05323: Rheumatoid arthritis 540113 (ATP6V1E2)
bta03420: Nucleotide excision repair 509602 (ERCC5)
bta04510: Focal adhesion 281848 (IGF1R)
bta04114: Oocyte meiosis, bta05214: Glioma 281848 (IGF1R)
bta05218: Melanoma, bta05200: Pathways in cancer 281848 (IGF1R)
bta04914: Progesterone-mediated oocyte maturation 281848 (IGF1R)
bta04520: Adherens junction 281848 (IGF1R)
bta04730: Long-term depression, 281848 (IGF1R)
bta04144: Endocytosis 281848 (IGF1R)
bta00740: Riboflavin metabolism 280951 (TYR)
bta04916: Melanogenesis 280951 (TYR)
bta00350: Tyrosine metabolism 280951 (TYR)
bta03015: mRNA surveillance pathway 281712 (CPSF3)
bta03008: Ribosome biogenesis in eukaryotes 508697 (HEATR1)
bta05010: Alzheimer’s disease 534774 (BACE2)
bta04360: Axon guidance 282032 (RASA1)
bta04740: Olfactory transduction 281701 (CNGA3)
bta00512: Mucin type O-Glycan biosynthesis 532545 (GALNT13)
bta05164: Influenza A 100048947 (RNASEL)
bta05160: Hepatitis C 100048947 RNASEL
bta04020: Calcium signalling pathway 282411 (CACNA1G)