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Table 2 Counts of markers with significant p-values (<0.05) in four traits comparing six imputation methods in a genome linkage analysisA

From: Comparison of missing data approaches in linkage analysis

Method

 

I

II

III

IV

V

VI

  

BMI

SBP

PC

BMI

SBP

PC

BMI

PC

BMI

CHL

SBP

PC

BMI

CHL

BMI

I

BMI

22

0

3

19

0

2

16

0

1

0

2

1

8

1

2

 

SBP

 

1

0

0

1

0

0

0

0

0

0

0

0

0

0

 

PC

  

15

2

0

9

0

1

0

0

0

0

4

0

5

II

BMI

   

19

0

2

15

0

1

0

2

1

8

1

9

 

SBP

    

1

0

0

0

0

0

0

0

0

0

0

 

PC

     

11

4

0

0

0

0

0

3

0

4

III

BMI

      

18

0

1

1

2

1

6

1

7

 

PC

       

1

0

0

0

0

0

0

0

IV

BMI

        

28

10

18

26

2

0

3

 

CHL

         

23

11

9

0

0

0

 

SBP

          

26

17

1

0

2

 

PC

           

27

2

0

3

V

BMI

            

20

1

17

 

CHL

             

3

1

VI

BMI

              

36

  1. ATraits not listed (for specific methods) did not exhibit any statistically significant linkage results.
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BMC Genomic Data

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