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Table 2 Estimation from three-point analysis of the recombination fraction ( ± SD) and the parental diplotype probabilities of parent P () and Q () for five markers in a full-sib family of n = 100

From: A multilocus likelihood approach to joint modeling of linkage, parental diplotype and gene order in a full-sib family

 

Parental diplotype

  

  

Marker

P

×

Q

Case 1

Case 2

Case 1

Case 2

Recombination fraction = 0.05

 

|

|

 

|

|

        

a

b

 

c

d

        
 

|

|

 

|

|

0.0511 ± 0.0175

       

a

b

 

a

b

 

0.1008 ± 0.0298

0.9978

0.9986

    
 

|

|

 

|

|

0.0578 ± 0.0269

   

0.0557 ± 0.0312

   

a

o

×

o

a

  

0.9977

0

 

0.0988 ± 0.0277

1

0

 

|

|

 

|

|

0.0512 ± 0.0307

   

0.0476 ± 0.0280

 

1

1/0

a

b

 

b

b

 

0.0932 ± 0.0301

1

1/0

  

1

1/0

 

|

|

 

|

|

0.0514 ± 0.0229

       

a

b

 

c

d

  

1

1

    
 

|

|

 

|

|

        

Recombination fraction = 0.20

 

|

|

 

|

|

        

a

b

 

c

d

        
 

|

|

 

|

|

0.2026 ± 0.0348

       

a

b

 

a

b

 

0.3282 ± 0.0482

0.9918

0.9916

    
 

|

|

 

|

|

0.2240 ± 0.0758

   

0.2408 ± 0.0939

   

a

o

×

o

a

  

0.9944

0

 

0.3241 ± 0.0488

1

0

 

|

|

 

|

|

0.1927 ± 0.0613

   

0.1824 ± 0.0614

   

a

b

 

b

b

 

0.3161 ± 0.0502

1

1/0

  

1

1/0

 

|

|

 

|

|

0.2017 ± 0.0393

       

a

b

 

c

d

  

1

1

    
 

|

|

 

|

|

        
  1. Case 1 denotes the recombination fraction between two adjacent markers, whereas case 2 denotes the recombination fraction between the two markers separated by a third marker. See Table 1 for other explanations.
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BMC Genomic Data

ISSN: 2730-6844

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