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Table 1 Mean Inter-marker distance and IC for STRPs, SNPs, and composite Markers

From: Comparison of microsatellites, single-nucleotide polymorphisms (SNPs) and composite markers derived from SNPs in linkage analysis

 

Mean intermarker distance in centimorgans (mean IC)

Map

Chr 1

Chr 3

Chr 5

Chr 9

STRP

6.90 (0.88)

6.80 (0.88)

6.54 (0.89)

6.74 (0.89)

3-cM SNP

    

1-SNPa

2.96 (0.81)

2.98 (0.83)

2.80 (0.85)

2.90 (0.82)

3-SNPb

9.83 (0.83)

9.66 (0.85)

9.29 (0.88)

9.59 (0.88)

5-SNPc

16.39 (0.81)

16.11 (0.83)

15.54 (0.84)

16.00 (0.93)

0.3-cM SNP

    

1-SNPa

0.34 (0.98)

0.25 (0.97)

0.31 (0.97)

0.29 (0.98)

3-SNPb

0.98 (0.99)

0.79 (0.98)

0.93 (0.98)

0.92 (0.99)

5-SNPc

1.58 (0.99)

1.26 (0.99)

1.64 (0.99)

1.55 (0.99)

  1. a Evenly spaced SNPs
  2. b 3 SNPs in a cluster
  3. c 5 SNPs in a cluster