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Table 2 Microsatellite loci diversity in the developed database.

From: Analysis of molecular diversity, population structure and linkage disequilibrium in a worldwide survey of cultivated barley germplasm (Hordeum vulgare L.)

Locus Chromosome Allelic richness (AR) Gene diversity (GD) Number of unique (rare) alleles Heterogeneity, (%)
   per locus per chromosome   per locus per chromosome  
Bmac0032 1H 33 110 0.86 4 (4) 39 1.7
HVM0020   12   0.73 4 (2)   1.2
Bmag0211   13   0.8 2 (1)   1.5
Bmag0382   14   0.64 5 (3)   1.5
Bmag0718   13   0.79 3 (1)   0.5
GBMS0184   13   0.77 2 (1)   2.7
Bmag0579   12   0.59 2 (5)   0.5
GBMS0247 2H 18 106 0.83 3 (2) 33 2.2
HVM0036   19   0.8 6 (3)   1.9
Bmag0518   21   0.8 3 (4)   1.7
GBMS0229   12   0.6 2 (5)   2.0
GBMS0160   15   0.75 2 (1)   1.3
HVM0054   12   0.78 1(0)   2.0
Bmag0749   9   0.74 1(0)   0.7
EBmac0705 3H 20 167 0.58 5 (3) 70 5.2
Bmag0603   25   0.85 7 (5)   1.5
GBMS0046   30   0.82 8 (8)   2.0
HVM0060   18   0.79 3 (5)   1.4
Bmag0225   22   0.91 2 (4)   1.8
GBMS0189   27   0.81 6 (5)   2.5
Bmag0013   25   0.82 4 (5)   1.3
HVM0040 4H 14 103 0.71 3 (3) 28 1.9
EBmac0906   11   0.77 4 (1)   1.5
GBMS0087   17   0.47 5 (1)   2
EBmac0701   17   0.84 1 (1)   2.4
GBMS0133   13   0.69 2 (2)   1.5
EBmac0788   20   0.84 1 (3)   1.6
HVM0067   11   0.73 0(1)   2.3
GBMS0032 5H 14 90 0.66 1 (1) 24 2
EBmac0684   10   0.73 1 (2)   0.6
GMS0061   7   0.71 0(1)   1.4
GMS0027   32   0.8 6 (7)   3.9
GBMS0119   14   0.74 0(1)   3.3
GMS0001   13   0.59 3 (1)   2.6
Bmac0316 6H 26 127 0.74 0 (11) 28 2
GBMS0083   14   0.84 1 (1)   2.1
GBMS0125   6   0.54 1 (2)   0.7
HVM0065   5   0.59 0 (0)   0.4
EBmac0602   21   0.73 1 (3)   2.3
Bmag0613   27   0.91 2 (2)   2.1
Bmac0040   28   0.92 2 (2)   2.5
GBMS0192 7H 12 96 0.71 1 (3) 33 10.4
GBMS0035   6   0.69 0 (0)   2.4
GBMS0111   15   0.38 2 (7)   0.5
Bmag0507   18   0.85 1 (2)   2.6
EBmac0755   20   0.74 5 (4)   6.6
GBMS0183   10   0.69 2 (2)   1.2
Bmag0135   15   0.78 1 (3)   0.8
In total   799    121 (134)   0.8
Average   16.7   0.74 2.6 (2.9)