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Table 2 Genes located within tumor suppressor region between 62.3-63.0 Mb on RNO10 at band 10q24 which is homologous to human chromosome band 17p13.3

From: Analysis of an independent tumor suppressor locus telomeric to Tp53 suggested Inpp5k and Myo1c as novel tumor suppressor gene candidates in this region

Start (Mb)

Gene

Description

Accession no.

Assay ID

62.23

Est1a

Telomerase-binding protein EST1A (Ever shorter telomeres 1A)

NM_001105808

Rn01466713_m1

62.47

Hic1

Hypermethylated in cancer 1

NM_001107021

CM-Hic1

62.48

Ovca2

Candidate tumor suppressor OVCA2

NM_001109036

CM-Ovca2

62.49

Ovca1

Candidate tumor suppressor OVCA1, Dph2l1

NM_001105809

CM-Ovca1

62.50

Rtn4rl1

Reticulon 4 receptor-like 1

NM_181377

Rn01648154_m1

62.61

Rpa1

Replication protein A1

NM_001047843

Rn01460703_g1

62.66

Smyd4

SET and MYND domain containing 4

NM_001105810

CM-Smyd4

62.71

Serpinf1

Serine (or cysteine) peptidase inhibitor, clade F, member 1

NM_177927

Rn00709999_m1

62.75

Serpinf2

Serine (or cysteine) peptidase inhibitor, clade F, member 2

NM_001011892

Rn01464596_m1

62.76

Wdr81

Wdr81, WD repeat domain 81

NM_001134360

Rn01460094_m1

62.79

Tlcd2

TLC domain containing 2

XM_573142.2

Rn01465130_m1

62.81

Prpf8

Pre-mRNA processing factor 8

XM_001080695

Rn01472027_g1

62.83

Rilp

Rab interacting lysosomal protein

NM_001105811

Rn01465376_g1

62.84

Scarf1

Scavenger receptor class F, member 1

NM_001107022

CM-Scarf1

62.85

Slc43a2

Solute carrier family 43, member 2

NM_001105812

CM-Slc43a2

62.91

Pitpna

Phosphatidylinositol transfer protein, alpha

NM_017231

Rn01464411_m1

62.95

Skip

Skeletal muscle and kidney enriched inositol phosphatase

NM_001013859

Rn01466844_g1

62.99

Myo1c

Myosin IC

NM_023092

Rn00576538_m1

63.02

Crk

V-crk sarcoma virus CT10 oncogene homolog (avian)

NM_019302

Rn00467066_m1

1q12

Rps9

Ribosomal protein S9

NM_031108.2

Rn01530912_g1

4q42

Gapdh

Glyceraldehyde-3-phosphate dehydrogenase

NM_017008.3

Rn99999916_s1

12p11

β-actin

Beta-actin

NM_031144

Rn00667869_m1

  1. TaqMan assays used in quantitative real-time PCR for the genes in the region as well as three housekeeping genes are presented
  2. CM: Custom made