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Table 5 QTLs for leaf rolling (RL) in rye mapping population RIL-M, coinciding with QTLs for other traits, mapped previously in this population

From: Putative candidate genes responsible for leaf rolling in rye (Secale cereale L.)

Chrom. Coinciding QTLs Marker nearest to the QTL peak QTL peak [cM] QTL interval [cM] LOD a r2
1R RL08–1 Xpr57L1900 98 96–101 2.7 0.33 8.61
TGW09 98 98–102 3.03 −1.94 9.42
1R RL12 XrPt507993 181 180–182 2.8 0.24 8.57
PHS08 181 178–183 3.02 −6.05 8.37
2R HE08 Xrpt507900 202 200–206 3.33 0.55 8.74
RL08–1 204 202–208 3.1 −0.31 9.63
4R GNPS08 XrPt508114 89 87–91 3.05 6.77 10.8
PHS10 89 85–106 2.69 −8.64 9.2
RL09–1 90 87–96 3.21 − 0.51 11.73
4R GNPS08 XrPt401039 207 206–208 4.47 −3.94 12.54
RL10–2 207 205–208 3.36 −0.36 10.77
GNPS_DI 207 205–210 2.73 12.76 15.45
5R SCT09 Xpr665L1050 81 73–84 2.8 −0.1 12.02
RL09–1 81 81–84 5.38 −0.35 18.59
RL10–1 83 80–84 2.94 −0.29 10.06
RL-08-1 84 82–84 4.01 −0.31 9.85
7R RL17 Xopo7 76 74–84 3.46 −0.32 9.17
PHS07 77 69–87 2.74 13.76 18.49
HE09 84 74–95 2.3 0.83 16.97
7R SNPP_DI XrPt507004 219 214–228 1.85 −8.38 9.9
PH08 220 216–222 2.76 4.15 8.31
RL12 221 210–221 4.24 −0.27 13.52
7R AA09 XrPt401480 227 226–238 8.25 1.21 22.85
RL10–1 227 227–228 3.68 −0.28 11.51
PHS08N 228 227–238 5.17 9.89 16.64
GW09 229 224–229 2.11 −0.09 6.62
  1. a – additive effect of the maternal allele, r2 – variance explained by a QTL
  2. TGW thousand grain weight, PHS preharvest sprouting, HE heading earliness, GNPS grain number per spike, GNPS_DI grain number per spike drought index, SCT spike compactness, SNPP_DI spike number per plant drought index, PH plant hight, AA α-amylase activity, GW grain weight per spike