From: Genetic mapping of physiological traits associated with terminal stage drought tolerance in rice
Marker name | Chrom# | position | Forward primer | Reverse primer | Repeat motif | Annl temp |
---|---|---|---|---|---|---|
RM495 | 1 | 2.8 | AATCCAAGGTGCAGAGATGG | CAACGATGACGAACACAACC | (CTG)7 | 55 °C |
RM6703 | 1 | 139.1 | CAGCAAACCAAACCAAGCC | GCGAGGAGGAGGAGAAAAAG | (TAC)12 | 55 °C |
RM3825 | 1 | 143.7 | AAAGCCCCCAAAAGCAGTAC | GTGAAACTCTGGGGTGTTCG | (GA)21 | 55 °C |
RM327 | 2 | 72.6 | CTACTCCTCTGTCCCTCCTCTC | CCAGCTAGACACAATCGAGC | (CAT)11(CTT)5 | 55 °C |
RM341 | 2 | 94.4 | CAAGAAACCTCAATCCGAGC | CTCCTCCCGATCCCAATC | (CTT)20 | 55 °C |
RM263 | 2 | 127.5 | CCCAGGCTAGCTCATGAACC | GCTACGTTTGAGCTACCACG | (CT)34 | 55 °C |
RM22 | 3 | 7.2 | GGTTTGGGAGCCCATAATCT | CTGGGCTTCTTTCACTCGTC | (GA)22 | 55 °C |
RM517 | 3 | 30.3 | GGCTTACTGGCTTCGATTTG | CGTCTCCTTTGGTTAGTGCC | (CT)15 | 55 °C |
RM527 | 6 | 61.2 | GGCTCGATCTAGAAAATCCG | TTGCACAGGTTGCGATAGAG | (GA)17 | 55 °C |
RM3 | 6 | 92.4 | ACACTGTAGCGGCCACTG | CCTCCACTGCTCCACATCTT | (GA)2GG(GA)25 | 55 °C |
RM337 | 8 | 0.1 | GTAGGAAAGGAAGGGCAGAG | CGATAGATAGCTAGATGTGGCC | (CTT)4–19-(CTT)8 | 55 °C |
RM72 | 8 | 60.9 | CCGGCGATAAAACAATGAG | GCATCGGTCCTAACTAAGGG | (TAT)5C(ATT)15 | 55 °C |
RM316 | 9 | 1.8 | CTAGTTGGGCATACGATGGC | ACGCTTATATGTTACGTCAAC | (GT)8-(TG)9 (TTTG)4 (TG)4 | 55 °C |
RM257 | 9 | 79.7 | CAGTTCCGAGCAAGAGTACTC | GGATCGGACGTGGCATATG | (CT)24 | 55 °C |
RM271 | 10 | 59.4 | TCAGATCTACAATTCCATCC | TCGGTGAGACCTAGAGAGCC | (GA)15 | 55 °C |
RM171 | 10 | 92.8 | AACGCGAGGACACGTACTTAC | ACGAGATACGTACGCCTTTG | (GATG)5 | 55 °C |
RM484 | 10 | 102.9 | TCTCCCTCCTCACCATTGTC | TGCTGCCCTCTCTCTCTCTC | (AT)9 | 55 °C |
RM20A | 12 | 0 | ATCTTGTCCCTGCAGGTCAT | GAAACAGAGGCACATTTCATTG | (ATT)14 | 55 °C |
RM511 | 12 | 59.8 | CTTCGATCCGGT GACGAC | AACGAAAGCGAAGCTGTCTC | (GAC)7 | 55 °C |
RM309 | 12 | 74.5 | GTAGATCACGCACCTTTCTGG | AGAAGGCCTCCGGTGAAG | (GT)13 | 55 °C |
RM519 | 12 | 94.8 | AGAGAGCCCCTAAATTTCCG | AGGTACGCTCACCTGTGGAC | (AAG)8 | 55 °C |