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Table 2 SNPs associated with coat color at genome-wide significant level

From: Association between MC1R gene and coat color segregation in Shanxia long black pig and Lulai black pig

SNP

Chromosome

Position, bp

Allele

Additive effect ± SE.

P value

rs337720748

6

787,448

A

0.101 ± 0.0105

6.48E-17

rs81305725

6

909,464

A

0.085 ± 0.0099

5.93E-14

rs324671806

6

2,156,953

A

0.099 ± 0.0127

1.42E-11

rs81238557

6

5,154,694

A

0.086 ± 0.0114

6.33E-11

rs346300681

6

5,821,382

G

0.055 ± 0.0074

1.57E-10

rs81334396

6

3,193,701

G

0.064 ± 0.0087

2.24E-10

rs81346632

6

8,245,682

C

0.077 ± 0.0107

4.37E-10

rs81307446

6

4,817,058

A

0.054 ± 0.0076

5.32E-10

rs81284048

6

8,219,229

A

0.052 ± 0.0077

4.03E-09

rs81393241

6

6,233,415

A

0.048 ± 0.0074

2.12E-08

rs81394823

6

6,587,482

C

0.051 ± 0.0081

6.62E-08

rs81248474

6

8,320,740

A

0.081 ± 0.0131

7.31E-08

rs81394715

6

6,100,613

G

0.062 ± 0.0103

1.71E-07

rs81388192

6

5,400,895

G

0.044 ± 0.0076

4.53E-07

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BMC Genomic Data

ISSN: 2730-6844

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