BMC Genomic Data

Table 1 The ORFs with length differences and the newly added regions between the RSs belonging to West African strains and RS1

From: Exploring the key genomic variation in monkeypox virus during the 2022 outbreak

ORF	Sequence Length
ORF	RS1	RS3	RS4	RS5	RS6	RS7	RS8	RS9	RS10
J1L	741	759
D4L	252	253	255	254	254	254	254	254	254
D11L	462	471	477	474	468	468	468	468	468
D13L	948	951	951	951	946	946	946	951	951
O1L	1329	1328
C2L	1128	1125					1126
C9L	1464	1484	1459	1454	1449	1449	1449	1449	1449
C11L	1032			1033	1036	1036	1036	1036	1036
C12L	222			224	224	224	224	224	224
C14L	195					185	185
H5R	642	633	633	633			633	633	633
H7R	441	435
A10L	303	321
A26L	228	227
A28L	1563	1527	1533	1539	1530	1530	1530	1530	1530
A32L	234	237	237	237				237	237
A33R	429							438	438
A48R	255	112	155	146	146	146	146	129	129
A50R	1665	1667	1667	1667				1667	1667
B1R	213	2457	2462	2475	2476	2476	2476	2476	2476
B5R	1686		1677
B7R	531							533	533
B10R	666	664	664
B14R	981	978	1017	1049	1049	1013	1049	1017	1013
B16R	1059			1065				1071	1071
B17R	2382	2364	2364	2364				2364	2364
B18R	213	214	214	214				214	214
B21R	5640	5643	5643	5643			5643	5643	5643
N3R	531		530
J1R	1764	1763	1763	1763			1763	1763	1763
J3R	741	759
New 1					109	109	109
New 2			402	402
New 3				162
New 4				297

Unfilled blanks are the same length as RS1; Start-stop site of newly added regions: New1: RS6 (13,791–13,683), RS7 (13,412–13,304), RS8 (13,410–13,302); New2: RS4 (47,852–48,253), RS5 (47,716–48,117); New3: RS5 (121,932–122,093); New4: RS5 (169,825–170,121)
Abbreviations: ORF Open reading frame, RS Reference sequence

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ISSN: 2730-6844

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