Table 1 Features of Rhus chloroplast genomes used in this study
Species | R. glabra | R. typhina | R. chinensis | R. potaninii | R. punjabensis | ||||
|---|---|---|---|---|---|---|---|---|---|
Accession No. | OR800752 | OR800753 | OR773067 | MN866894 | MT083895 | OP326720 | MT230556 | MN866893 | MT230555 |
Location | Ohio, US | Georgia, US | New York, US | Unknown | Shandong, China | Hubei, China | Shaanxi, China | Beijing, China | Hubei, China |
Total Length (bp) | 159,984 | 159,944 | 159,940 | 160,254 | 160,204 | 159,187 | 159,620 | 159,616 | 159,617 |
LSC (bp) | 88,002 | 87,935 | 87,955 | 87,789 | 87,789 | 87,653 | 87,722 | 87,710 | 87,694 |
SSC (bp) | 18,862 | 18,891 | 18,865 | 19,453 | 19,319 | 18,522 | 18,948 | 18,956 | 18,971 |
IR (bp) | 26,560 | 26,559 | 26,560 | 26,506 | 26,548 | 26,506 | 26,475 | 26,475 | 26,476 |
Total Genes | 135 | 135 | 133 | 133 | 133 | ||||
CDS | 88 | 88 | 86 | 86 | 86 | ||||
tRNA | 37 | 37 | 37 | 37 | 37 | ||||
rRNA | 8 | 8 | 8 | 8 | 8 | ||||
Pseudogene | infA, ycf1 | infA, ycf1 | infA, ycf1 | infA, ycf1 | infA, ycf1 | ||||
Total GC% | 37.8 | 37.8 | 37.8 | 37.9 | 37.9 | ||||
LSC (GC%) | 35.8 | 35.8 | 35.8 | 35.8 | 35.9 | 36.0 | 36.0 | ||
SSC (GC%) | 32.4 | 32.4 | 32.6 | 32.5 | 32.6 | 32.6 | 32.6 | ||
IR (GC%) | 42.9 | 42.9 | 42.9 | 42.9 | 42.6 | 43.0 | 43.0 | ||
A% | 30.80 | 30.80 | 30.85 | 30.80 | 30.80 | 30.72 | 30.72 | 30.72 | |
C% | 19.20 | 19.20 | 19.21 | 19.20 | 19.30 | 19.29 | 19.30 | 19.29 | |
G% | 18.60 | 18.60 | 18.57 | 18.60 | 18.60 | 18.61 | 18.60 | 18.61 | |
T% | 31.40 | 31.40 | 31.37 | 31.40 | 31.40 | 31.38 | 31.38 | 31.38 | |