Skip to main content

Table 2 Transcriptome quality control results statistics

From: Transcriptome analysis reveals regulatory mechanisms of different drought-tolerant Gleditsia sinensis seedlings under drought stress

Sample

Raw reads

Number

Raw bases

Clean reads

Clean bases

Error rate(%)

Q20

Q30

GC

Clean reads Mapped ratio

CHS 1

4.18E + 07

6.32E + 09

4.14E + 07

6.11E + 09

0.0255

97.92

93.7

43.44

79.42%

CHS 2

4.25E + 07

6.41E + 09

4.20E + 07

6.21E + 09

0.0261

97.67

93.09

43.43

78.38%

CHS 3

4.70E + 07

7.10E + 09

4.65E + 07

6.85E + 09

0.0258

97.81

93.4

43.32

78.14%

DHS 1

5.54E + 07

8.36E + 09

5.50E + 07

8.19E + 09

0.0258

97.80

93.32

44.69

78.90%

DHS 2

5.09E + 07

7.68E + 09

5.06E + 07

7.51E + 09

0.0254

97.97

93.75

44.81

79.90%

DHS 3

6.07E + 07

9.16E + 09

6.01E + 07

8.86E + 09

0.0263

97.61

92.93

44.92

80.14%

SHS 1

5.73E + 07

8.65E + 09

5.69E + 07

8.45E + 09

0.0256

97.87

93.54

44.19

78.42%

SHS 2

4.80E + 07

7.24E + 09

4.77E + 07

7.07E + 09

0.025

98.15

94.12

44.36

79.31%

SHS 3

4.95E + 07

7.48E + 09

4.92E + 07

7.26E + 09

0.0264

97.55

92.77

44.21

79.43%

rHS 1

6.34E + 07

9.58E + 09

6.30E + 07

9.24E + 09

0.0252

98.05

93.90

44.87

81.82%

rHS 2

4.64E + 07

7.00E + 09

4.60E + 07

6.70E + 09

0.0254

97.95

93.75

44.49

81.45%

rHS 3

6.55E + 07

9.89E + 09

6.51E + 07

9.58E + 09

0.0259

97.81

93.27

44.87

81.51%

RHS 1

6.28E + 07

9.49E + 09

6.24E + 07

9.22E + 09

0.0254

97.97

93.77

44.95

80.85%

RHS 2

5.46E + 07

8.25E + 09

5.42E + 07

7.92E + 09

0.0253

97.99

93.84

45.17

82.42%

RHS 3

5.55E + 07

8.38E + 09

5.52E + 07

8.10E + 09

0.0252

98.05

93.97

45.01

81.34%

CHR 1

4.86E + 07

7.33E + 09

4.82E + 07

7.11E + 09

0.0251

98.09

94.02

44.70

80.54%

CHR 2

5.28E + 07

7.97E + 09

5.23E + 07

7.71E + 09

0.0258

97.78

93.33

44.66

80.29%

CHR 3

5.47E + 07

8.27E + 09

5.43E + 07

8.01E + 09

0.0254

97.97

93.77

44.75

80.44%

DHR 1

5.37E + 07

8.11E + 09

5.34E + 07

7.90E + 09

0.0256

97.86

93.51

45.17

80.82%

DHR 2

5.17E + 07

7.81E + 09

5.13E + 07

7.50E + 09

0.0253

98.00

93.88

45.42

83.16%

DHR 3

5.26E + 07

7.94E + 09

5.23E + 07

7.75E + 09

0.025

98.14

94.13

45.01

80.16%

SHR 1

5.18E + 07

7.82E + 09

5.15E + 07

7.64E + 09

0.0257

97.83

93.37

44.60

80.72%

SHR 2

4.87E + 07

7.36E + 09

4.84E + 07

7.16E + 09

0.0262

97.65

92.98

44.61

80.52%

SHR 3

5.02E + 07

7.58E + 09

4.99E + 07

7.38E + 09

0.0254

97.98

93.77

44.66

81.55%

rHR 1

5.35E + 07

8.08E + 09

5.31E + 07

7.81E + 09

0.0257

97.82

93.42

45.02

81.84%

rHR 2

5.18E + 07

7.82E + 09

5.14E + 07

7.59E + 09

0.0257

97.83

93.4

44.83

81.99%

rHR 3

4.93E + 07

7.44E + 09

4.90E + 07

7.26E + 09

0.0254

97.98

93.77

44.71

81.35%

RHR 1

5.94E + 07

8.96E + 09

5.89E + 07

8.68E + 09

0.0251

98.08

94.03

44.95

82.34%

RHR 2

6.55E + 07

9.90E + 09

6.50E + 07

9.54E + 09

0.0253

98.01

93.89

44.96

82.52%

RHR 3

5.48E + 07

8.28E + 09

5.44E + 07

7.96E + 09

0.0254

97.96

93.78

44.92

82.62%