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Volume 6 Supplement 1

Genetic Analysis Workshop 14: Microsatellite and single-nucleotide polymorphism

Proceedings

Edited by Joan E Bailey-Wilson, Laura Almasy, Mariza de Andrade, Julia Bailey, Heike Bickeböller, Heather J Cordell, E Warwick Daw, Lynn Goldin, Ellen L Goode, Courtney Gray-McGuire, Wayne Hening, Gail Jarvik, Brion S Maher, Nancy Mendell, Andrew D Paterson, John Rice, Glen Satten, Brian Suarez, Veronica Vieland, Marsha Wilcox, Heping Zhang, Andreas Ziegler and Jean W MacCluer

Genetic Analysis Workshop 14: Microsatellite and single-nucleotide polymorphism. Go to conference site.

Noordwijkerhout, The Netherlands7-10 September 2004

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  1. Content type: Proceedings

    We used our newly developed linkage disequilibrium (LD) plotting software, JLIN, to plot linkage disequilibrium between pairs of single-nucleotide polymorphisms (SNPs) for three chromosomes of the Genetic Anal...

    Authors: Pamela A McCaskie, Kim W Carter, Simon R McCaskie and Lyle J Palmer

    Citation: BMC Genetics 2005 6(Suppl 1):S151

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  2. Content type: Proceedings

    The overlap of 94 single-nucleotide polymorphisms (SNP) among the 4,720 and 11,120 SNPs contained in the linkage panels of Illumina and Affymetrix, respectively, allows an assessment of the discrepancy rate pr...

    Authors: Brian K Suarez, Chelsea Taylor, Sarah Bertelsen, Laura J Bierut, Gerald Dunn, Carol H Jin, John SK Kauwe, Andrew D Paterson and Anthony L Hinrichs

    Citation: BMC Genetics 2005 6(Suppl 1):S152

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  3. Content type: Proceedings

    Errors while genotyping are inevitable and can reduce the power to detect linkage. However, does genotyping error have the same impact on linkage results for single-nucleotide polymorphism (SNP) and microsatel...

    Authors: Cheryl L Thompson, Dan Baechle, Qing Lu, George Mathew, Yeunjoo Song, Sudha K Iyengar, Courtney Gray-McGuire and Katrina AB Goddard

    Citation: BMC Genetics 2005 6(Suppl 1):S153

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  4. Content type: Proceedings

    Genetic Analysis Workshop 14 provided re-genotyped single-nucleotide polymorphism (SNP) data. Specifically, both Center for Inherited Disease Research (CIDR) and Affymetrix genotyped the same 11,560 SNPs from ...

    Authors: Nathan L Tintle, Kwangmi Ahn, Nancy Role Mendell, Derek Gordon and Stephen J Finch

    Citation: BMC Genetics 2005 6(Suppl 1):S154

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  5. Content type: Proceedings

    P300 amplitude is an electrophysiological quantitative trait that is correlated with both alcoholism and smoking status. Using the Collaborative Study on the Genetics of Alcoholism data, we performed model-fre...

    Authors: Jocelyn F Bautista, Shannon RE Quade, Antonio R Parrado and Katrina AB Goddard

    Citation: BMC Genetics 2005 6(Suppl 1):S156

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  6. Content type: Proceedings

    We report a simple and rapid method for detecting additive genetic variance due to X-linked loci in the absence of marker data for this chromosome. We examined the interaction of this method with an establishe...

    Authors: Jack W Kent Jr, Loren R Lease, Michael C Mahaney, Thomas D Dyer, Laura Almasy and John Blangero

    Citation: BMC Genetics 2005 6(Suppl 1):S157

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  7. Content type: Proceedings

    We report the results of statistical genetic analyses of data from the Collaborative Study on the Genetics of Alcoholism prepared for the Genetic Analysis Workshop 14 to detect and characterize maternally inhe...

    Authors: Loren R Lease, Deidre A Winnier, Jeff T Williams, Thomas D Dyer, Laura Almasy and Michael C Mahaney

    Citation: BMC Genetics 2005 6(Suppl 1):S158

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  8. Content type: Proceedings

    A simple multipoint procedure to test for parent-of-origin effects in samples of affected siblings is discussed. The procedure consists of artificially changing all full sibs to half-sibs, with distinct mother...

    Authors: Mathieu Lemire

    Citation: BMC Genetics 2005 6(Suppl 1):S159

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  9. Content type: Proceedings

    Alcohol dependence is a typical example of a complex trait that is governed by several genes and for which the mode of inheritance is unknown. We analyzed the microsatellite markers and the Affymetrix single-n...

    Authors: Konstantin Strauch, Robert Fürst, Franz Rüschendorf, Christine Windemuth, Johannes Dietter, Antonia Flaquer, Max P Baur and Thomas F Wienker

    Citation: BMC Genetics 2005 6(Suppl 1):S162

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